Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR10R3P-201ENST00000361688 942 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 SNORD1C-201ENST00000363315 78 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 SNORD65-201ENST00000391079 73 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC245096.1-201ENST00000413104 546 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC097463.1-201ENST00000447288 481 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 VN1R48P-201ENST00000448149 1036 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 SDC4P-201ENST00000453285 601 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AL117692.1-201ENST00000494283 713 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC025768.1-201ENST00000510057 267 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.59□□□□□ -1.51
NKX2-2O95096 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC007346.1-201ENST00000569208 867 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC073333.2-201ENST00000603589 769 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC092681.3-201ENST00000609463 678 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC244100.4-201ENST00000617747 388 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC048341.3-201ENST00000619323 491 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 FO681491.1-202ENST00000623392 737 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 AC020978.9-201ENST00000624380 1141 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NKX2-2O95096 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 THAP12P9-201ENST00000503971 2360 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.59□□□□□ -1.52
NKX2-2O95096 MTND5P23-201ENST00000430812 1655 ntBASIC5.59□□□□□ -1.52
NKX2-2O95096 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NKX2-2O95096 BX284613.1-201ENST00000452221 1641 ntBASIC5.59□□□□□ -1.52
NKX2-2O95096 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NKX2-2O95096 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.59□□□□□ -1.52
NKX2-2O95096 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NKX2-2O95096 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-2O95096 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-2O95096 PPBPP2-201ENST00000513150 1362 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-2O95096 GNG5P2-201ENST00000372054 207 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NKX2-2O95096 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.58□□□□□ -1.52
NKX2-2O95096 RPL23AP18-201ENST00000416139 468 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 NMD3P2-201ENST00000421815 761 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC007563.3-201ENST00000433233 371 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC046176.1-201ENST00000435260 1170 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 MTND2P30-201ENST00000456663 382 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC083795.1-201ENST00000491760 320 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC016550.3-201ENST00000515706 767 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 RN7SKP67-201ENST00000515905 235 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AP003049.1-201ENST00000529418 457 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 OR4A6P-201ENST00000534364 970 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC027176.2-201ENST00000559166 746 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC092332.1-201ENST00000563684 829 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-2O95096 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC124916.2-201ENST00000604416 224 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AL359091.2-201ENST00000609303 556 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AL159169.2-201ENST00000610061 1269 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AL355974.3-201ENST00000617383 467 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC019080.5-201ENST00000624891 757 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 AC097372.4-201ENST00000625025 466 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-2O95096 AC073488.3-201ENST00000631611 778 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 CASC19-274ENST00000642018 970 ntBASIC5.58□□□□□ -1.52
NKX2-2O95096 HSPD1P9-201ENST00000420325 1636 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms