Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 AC010928.1-201ENST00000592477 1447 ntBASIC2.44□□□□□ -2.02
USH2AO75445 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 AC092070.2-203ENST00000598377 3644 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC006213.6-201ENST00000623722 4179 ntBASIC2.44□□□□□ -2.02
USH2AO75445 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 RPL5P5-201ENST00000392009 893 ntBASIC2.44□□□□□ -2.02
USH2AO75445 MIR1204-201ENST00000408388 67 ntBASIC2.44□□□□□ -2.02
USH2AO75445 FAM96AP1-201ENST00000430879 482 ntBASIC2.44□□□□□ -2.02
USH2AO75445 LDHAP2-201ENST00000437325 985 ntBASIC2.44□□□□□ -2.02
USH2AO75445 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 AC023141.8-201ENST00000442554 208 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL022237.1-201ENST00000446663 358 ntBASIC2.44□□□□□ -2.02
USH2AO75445 RPL5P9-201ENST00000448118 886 ntBASIC2.44□□□□□ -2.02
USH2AO75445 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 RPL7P32-201ENST00000457119 744 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC093720.1-201ENST00000505681 714 ntBASIC2.44□□□□□ -2.02
USH2AO75445 MIR4691-201ENST00000583764 85 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 AC024589.2-201ENST00000605642 1294 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 AC022726.2-201ENST00000634673 547 ntBASIC2.44□□□□□ -2.02
USH2AO75445 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USH2AO75445 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USH2AO75445 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 UGT2B25P-201ENST00000511504 1586 ntBASIC2.44□□□□□ -2.02
USH2AO75445 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 SNORA63.1-201ENST00000362493 131 ntBASIC2.44□□□□□ -2.02
USH2AO75445 RN7SKP149-201ENST00000363008 344 ntBASIC2.44□□□□□ -2.02
USH2AO75445 GAPDHP15-201ENST00000398586 975 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL713922.1-201ENST00000416477 747 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 HSPD1P12-201ENST00000429127 1069 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 VDAC2P4-201ENST00000452925 711 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC112187.1-201ENST00000455837 479 ntBASIC2.44□□□□□ -2.02
USH2AO75445 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 AP001880.2-201ENST00000538233 448 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC008147.3-201ENST00000548666 354 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC023575.1-201ENST00000580510 358 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC095055.1-201ENST00000603472 1113 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AP005432.2-201ENST00000608162 586 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC027348.2-201ENST00000624375 642 ntBASIC2.44□□□□□ -2.02
USH2AO75445 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC2.43□□□□□ -2.02
USH2AO75445 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AL133243.4-201ENST00000623116 3109 ntBASIC2.43□□□□□ -2.02
USH2AO75445 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AL132640.2-201ENST00000559968 1698 ntBASIC2.43□□□□□ -2.02
USH2AO75445 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.43□□□□□ -2.02
USH2AO75445 OR1L6-202ENST00000373684 1044 ntBASIC2.43□□□□□ -2.02
USH2AO75445 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 RNA5SP113-201ENST00000410486 84 ntBASIC2.43□□□□□ -2.02
USH2AO75445 RN7SKP126-201ENST00000411143 300 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC006065.1-201ENST00000422539 802 ntBASIC2.43□□□□□ -2.02
USH2AO75445 RPEP3-201ENST00000425462 676 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AL603882.1-201ENST00000463059 681 ntBASIC2.43□□□□□ -2.02
USH2AO75445 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 FGB-207ENST00000509493 1164 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 RNA5SP43-201ENST00000516559 110 ntBASIC2.43□□□□□ -2.02
USH2AO75445 OR56A7P-201ENST00000524865 941 ntBASIC2.43□□□□□ -2.02
USH2AO75445 OR5M2P-201ENST00000529003 936 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms