Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 MAPK10-287ENST00000641217 3037 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM38O00635 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 BX284613.1-201ENST00000452221 1641 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC110792.3-201ENST00000595906 1614 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 RN7SKP281-201ENST00000410472 352 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 MED28P4-201ENST00000433137 572 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 EMC3-AS1-205ENST00000438698 534 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 AL645936.1-201ENST00000441979 518 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC007000.2-201ENST00000442564 487 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM38O00635 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 MTND6P32-201ENST00000457611 483 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC009963.3-201ENST00000458090 486 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 CABYRP1-201ENST00000465493 1045 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 RN7SL221P-201ENST00000466190 281 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 RPL12P30-201ENST00000488389 499 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 RBBP4P1-201ENST00000502424 1276 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC027338.1-201ENST00000514840 825 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 AP003080.1-202ENST00000526526 915 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC007494.1-201ENST00000562293 760 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM38O00635 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 AC067773.1-201ENST00000603284 1094 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AL356986.1-201ENST00000604085 341 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC017076.1-201ENST00000607613 578 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AC084824.5-201ENST00000612009 413 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 CR589904.2-201ENST00000612533 440 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM38O00635 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC241377.1-201ENST00000619797 406 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 TTC41P-205ENST00000551270 3963 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 UGT2B24P-201ENST00000514441 1597 ntBASIC6.3□□□□□ -1.4
TRIM38O00635 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
TRIM38O00635 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM38O00635 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM38O00635 AC105235.1-201ENST00000623208 1816 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 AC010132.2-201ENST00000295493 1043 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 RNU1-59P-201ENST00000364829 162 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM38O00635 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 RPL10P10-201ENST00000403509 664 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 HMGA1P8-201ENST00000414130 321 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM38O00635 RPS26P4-201ENST00000431743 355 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC068228.1-201ENST00000461723 211 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 AC022415.1-202ENST00000486612 523 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms