Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TCRBV4S1A1TA0A5B7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.74□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL355834.1-201ENST00000556602 3965 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC007998.4-201ENST00000612496 2533 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RNA5SP273-201ENST00000362484 113 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RN7SKP186-201ENST00000365371 303 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NPM1P37-201ENST00000403105 874 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NAP1L4P2-201ENST00000425958 899 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC073109.1-201ENST00000445066 978 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC016027.4-201ENST00000450866 277 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 OR2AF1P-201ENST00000454899 889 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ACA64.4-201ENST00000459070 127 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC079080.1-201ENST00000479841 822 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RN7SKP288-201ENST00000516227 268 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC079600.1-201ENST00000550326 297 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RN7SL753P-201ENST00000581238 290 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC119403.2-201ENST00000590960 598 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MIR6793-201ENST00000612376 63 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MIR6729-201ENST00000618194 65 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC093671.1-201ENST00000624981 2929 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AF287957.1-201ENST00000607368 1595 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 KARSP1-201ENST00000451871 1752 ntBASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.73□□□□□ -1.65
TCRBV4S1A1TA0A5B7 GNL2P1-201ENST00000451274 2190 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RBPJP7-201ENST00000442803 1447 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RBPJP5-201ENST00000449433 1447 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL355488.2-201ENST00000609909 2850 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 TMSB4XP2-201ENST00000335179 210 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RNU105B-201ENST00000364478 208 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL031985.1-201ENST00000392713 418 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 EEF1B2P8-201ENST00000414101 671 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RPS15AP30-201ENST00000420976 390 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL035660.1-201ENST00000422041 222 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL445466.1-201ENST00000448432 357 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SETP4-201ENST00000455717 868 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC108751.3-201ENST00000461814 1020 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RN7SL193P-201ENST00000491708 276 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 PSMA2P2-201ENST00000504319 686 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SNORD46.2-201ENST00000516021 102 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC022826.1-201ENST00000519383 805 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 IGKV3D-34-201ENST00000522638 302 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC136777.2-201ENST00000522979 358 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms