Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC087276.1-201ENST00000529659 480 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AP002812.4-201ENST00000532139 286 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 UBE2CP1-201ENST00000557130 554 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC040162.2-201ENST00000573092 157 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 MIR4682-201ENST00000580643 80 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC090616.5-202ENST00000582111 297 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 UBE2V2P2-201ENST00000587677 504 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC140658.6-201ENST00000603958 201 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL606760.4-201ENST00000617613 718 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 MIR3120-201ENST00000636555 81 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092326.2-201ENST00000624772 1561 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02128-205ENST00000641755 1334 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC137056.2-201ENST00000624055 1958 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU6-666P-201ENST00000363499 107 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 VDAC1P2-201ENST00000423609 850 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 Z93242.1-201ENST00000427102 353 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 MTND6P5-201ENST00000448266 512 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 COX6CP18-201ENST00000448769 222 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092570.2-201ENST00000452117 1143 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RN7SL496P-201ENST00000470372 290 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AL355076.1-201ENST00000484315 270 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 ARL4AP2-201ENST00000507378 601 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 SNORA70.23-201ENST00000517218 151 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AP001189.2-201ENST00000527320 189 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 OR6M3P-201ENST00000531567 700 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 FDPSP3-201ENST00000556903 1013 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RN7SL473P-201ENST00000580341 299 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 SNX29P2-204ENST00000603801 875 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU6-88P-201ENST00000606801 100 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC103710.1-201ENST00000610003 901 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC055764.2-201ENST00000610089 670 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC123788.2-201ENST00000612290 283 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092650.2-201ENST00000619984 902 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC005609.2-201ENST00000623320 592 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC119674.1-212ENST00000641155 993 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms