Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MIR4271-201ENST00000582451 67 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC090236.2-201ENST00000587933 1101 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC012254.3-201ENST00000591183 2117 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AL136131.3-201ENST00000607600 188 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC073592.6-201ENST00000624271 415 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC073593.1-201ENST00000624500 411 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.4□□□□□ -1.55
TRAPPC4Q9Y296 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC092376.2-201ENST00000622621 4116 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 CASC19-238ENST00000641523 1558 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP185-201ENST00000362813 326 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 TUBB4BP6-201ENST00000437576 479 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 SDC4P-201ENST00000453285 601 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 ACA64.4-201ENST00000459070 127 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC104339.1-201ENST00000465478 348 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 RNA5SP473-201ENST00000516402 125 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP35-201ENST00000517210 151 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 IGKV3D-25-201ENST00000519599 235 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC107958.1-201ENST00000556576 290 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AP005119.1-201ENST00000580956 292 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC005244.1-201ENST00000582566 339 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC008507.3-201ENST00000585753 472 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC010487.1-201ENST00000594408 1172 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 LSM1P2-201ENST00000604911 322 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC091167.5-201ENST00000605689 894 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC244517.3-201ENST00000616254 1235 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC004801.6-201ENST00000616571 978 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC138965.3-201ENST00000623875 498 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC090220.1-201ENST00000593078 1699 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC008627.1-201ENST00000517511 1704 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AC006600.2-201ENST00000624834 2506 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 AL354854.1-201ENST00000455940 1363 ntBASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRAPPC4Q9Y296 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 RNA5SP431-201ENST00000410312 120 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 RPL35AP3-201ENST00000414680 288 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms