Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 CLNS1AP1-201ENST00000435954 682 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AC015983.1-201ENST00000441577 373 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AC105420.1-201ENST00000504389 582 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 RN7SKP238-201ENST00000516483 249 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AL845552.1-201ENST00000556820 323 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 RNU6-84P-201ENST00000607737 102 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AL359091.2-201ENST00000609303 556 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 MIR6809-201ENST00000612189 116 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 MIR6806-201ENST00000622141 64 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 MTCO1P46-201ENST00000451639 1491 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 AC004656.1-201ENST00000568479 4951 ntBASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRRC40Q9H9A6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 CASC19-238ENST00000641523 1558 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 PARP4P2-201ENST00000446672 3326 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 U3.10-201ENST00000364459 214 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 RN7SKP78-201ENST00000364711 318 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 NPM1P48-201ENST00000436002 853 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 PPIAP27-201ENST00000453800 265 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC004129.2-201ENST00000457229 287 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC023194.2-201ENST00000465398 406 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AL157777.1-201ENST00000468100 304 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC099521.1-201ENST00000482557 334 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 RN7SKP5-201ENST00000517045 272 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC126615.2-201ENST00000553003 515 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC007956.1-201ENST00000555623 542 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC002310.3-201ENST00000569728 723 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC091167.5-201ENST00000605689 894 ntBASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.93□□□□□ -1.46
LRRC40Q9H9A6 AC025470.1-201ENST00000510053 2032 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 GTF2IP4-201ENST00000453092 2054 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms