Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC006511.3-201ENST00000624929 1783 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 PPM1AP1-201ENST00000502740 1135 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AL445423.1-201ENST00000609941 536 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 RPL10P10-201ENST00000403509 664 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 MIR5095-201ENST00000578844 88 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 MLECP1-201ENST00000615893 709 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AL359757.1-201ENST00000623176 255 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 TNC-210ENST00000535648 7508 ntTSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AL590004.4-201ENST00000566733 7060 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 DSTNP5-201ENST00000427921 523 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 MRPS33P2-201ENST00000507850 322 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 MIR4675-201ENST00000577898 77 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC010478.1-201ENST00000601500 6762 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC092821.2-201ENST00000545710 2042 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 FP325330.3-201ENST00000623760 9537 ntBASIC4.7□□□□□ -1.66
CSMD1Q96PZ7 AC008937.3-201ENST00000606813 1700 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AL359837.1-201ENST00000381357 287 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SNORA48.7-201ENST00000391302 135 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC135068.12-201ENST00000637370 931 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms