Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC079178.2-201ENST00000439323 1624 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AP002800.1-201ENST00000624982 2225 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 NACA3P-201ENST00000359690 648 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 RNU6-157P-201ENST00000383957 107 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 DNAJC19P6-201ENST00000401853 280 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CDY17P-201ENST00000414121 1282 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 OR4K6P-201ENST00000416478 897 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CDY8P-201ENST00000428380 1279 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC018804.1-201ENST00000430381 618 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LSM3P3-201ENST00000436601 306 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC007327.1-201ENST00000447461 264 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CDY20P-201ENST00000447528 1279 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 GYG1P1-201ENST00000460864 698 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC021074.2-201ENST00000468434 172 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC090058.1-201ENST00000498788 435 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC017007.1-201ENST00000511960 415 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 SNORA31.13-201ENST00000516624 135 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP11-201ENST00000517018 287 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 IGLVV-66-201ENST00000523818 341 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 ACTG1P15-201ENST00000570019 1063 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL031281.1-201ENST00000604049 488 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL139286.2-201ENST00000606838 396 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC007671.1-201ENST00000616957 830 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AL450226.2-201ENST00000622913 439 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 Z83820.1-201ENST00000456978 1499 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 AC009135.2-201ENST00000624136 1768 ntBASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTCHD1Q96NR3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms