Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC233289.1-201ENST00000403700 508 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 RN7SKP86-201ENST00000410454 332 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC099782.1-201ENST00000425889 474 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 POU5F1P5-201ENST00000445059 658 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL591623.2-201ENST00000449978 222 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC108751.3-201ENST00000461814 1020 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 RN7SL552P-201ENST00000462094 276 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 RN7SL643P-201ENST00000471845 291 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 RN7SL741P-201ENST00000482473 289 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 RN7SL362P-201ENST00000494228 267 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL671862.1-201ENST00000515851 349 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 COX6B1P4-201ENST00000519826 484 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 IGHV4-55-201ENST00000520889 368 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC109635.6-201ENST00000525487 1113 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC027281.1-201ENST00000574178 758 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 OR51C1P-201ENST00000608504 942 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.95□□□□□ -1.46
VMP1Q96GC9 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AL591135.1-201ENST00000401578 5914 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 RN7SKP171-201ENST00000364417 303 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 DHFRP2-201ENST00000414224 547 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC093084.1-201ENST00000424233 687 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 HMGB1P32-201ENST00000425971 565 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 RPL5P10-201ENST00000445207 894 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 RN7SL714P-201ENST00000487050 298 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 EIF1AXP2-201ENST00000555940 413 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AL390334.1-201ENST00000556395 450 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 MIR3154-201ENST00000577829 84 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.94□□□□□ -1.46
VMP1Q96GC9 HSPA8P14-201ENST00000552265 1805 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 VPS35P1-201ENST00000563400 1518 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 AL731532.1-201ENST00000623972 4236 ntBASIC5.94□□□□□ -1.46
VMP1Q96GC9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VMP1Q96GC9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms