Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL157831.2-201ENST00000564681 3095 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RNU1-77P-201ENST00000390868 162 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RPS16P5-201ENST00000406501 404 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC021074.2-201ENST00000468434 172 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC024940.3-201ENST00000538551 316 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC126615.2-201ENST00000553003 515 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AP004289.1-201ENST00000436307 2205 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL731556.1-201ENST00000394628 3711 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 HSPA8P18-201ENST00000439846 1928 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC005294.1-201ENST00000355509 281 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 CHMP1B2P-201ENST00000399581 597 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RNA5SP251-201ENST00000410614 137 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 DSTNP5-201ENST00000427921 523 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 OR56A7P-201ENST00000524865 941 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AL662795.2-201ENST00000624252 3706 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 Z97832.2-201ENST00000605896 4261 ntBASIC3.83□□□□□ -1.8
ALMS1Q8TCU4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AL162456.1-201ENST00000634535 2006 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 TNPO1P2-201ENST00000426249 2665 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC019050.1-201ENST00000418508 492 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC015977.1-201ENST00000418887 292 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 MIR2117-201ENST00000516780 80 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 BNIP3P1-201ENST00000547295 580 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC073869.10-201ENST00000642016 354 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AL356317.1-201ENST00000396110 1436 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 OR55B1P-203ENST00000641518 2602 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AP001885.1-201ENST00000621658 558 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 RNA5SP305-201ENST00000362665 119 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms