Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AP004289.1-201ENST00000436307 2205 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 RNA5SP335-201ENST00000363817 110 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 RNA5SP131-201ENST00000365452 119 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 SLC35E1P1-201ENST00000419313 864 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AL450023.1-201ENST00000450868 751 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AL035090.1-201ENST00000454835 332 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC004129.2-201ENST00000457229 287 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC022215.1-201ENST00000481770 362 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 SKA2-207ENST00000583380 583 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 WBP1LP8-201ENST00000617401 327 ntBASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC168Q8NDH2 AC009166.2-201ENST00000624410 2833 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 USP9YP9-201ENST00000429406 715 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AC019185.1-201ENST00000442718 389 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AC092324.1-201ENST00000468671 324 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RN7SL570P-201ENST00000484405 292 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RPL37AP8-201ENST00000494116 276 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 SNRPCP2-201ENST00000504370 475 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 OR5AZ1P-201ENST00000527448 943 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 BNIP3P22-201ENST00000593399 556 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 MIR6780A-201ENST00000615089 68 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 GUCY1B2-204ENST00000531898 1979 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RNA5SP211-201ENST00000365516 117 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AL133388.1-201ENST00000404509 287 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 MIR3189-201ENST00000578735 73 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 AC011455.2-201ENST00000599320 3336 ntBASIC4.88□□□□□ -1.63
CCDC168Q8NDH2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 AP002370.1-201ENST00000528055 1602 ntBASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 AL360271.1-201ENST00000395679 510 ntBASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC168Q8NDH2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms