Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HERC6Q8IVU3 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AC005332.9-201ENST00000620266 2921 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 RNU6-1331P-201ENST00000363658 106 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 ZNF619P1-201ENST00000446539 752 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 GEMIN2P1-201ENST00000454246 752 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 RN7SL610P-201ENST00000463845 291 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 SNORA70.20-201ENST00000516848 126 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 RNA5SP34-201ENST00000516887 130 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 FAM60CP-201ENST00000591086 664 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 RPL12P48-201ENST00000605620 304 ntBASIC6.63□□□□□ -1.35
HERC6Q8IVU3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.63□□□□□ -1.35
HERC6Q8IVU3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC013488.1-201ENST00000526618 1838 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 CCAT2-201ENST00000630920 1752 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 OR51C1P-202ENST00000641159 1444 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 RNU6-697P-201ENST00000363348 107 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 SNORA74A-201ENST00000364089 198 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL607077.1-201ENST00000401718 499 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL589655.1-201ENST00000405398 482 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AP006245.2-201ENST00000522004 300 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC093524.1-201ENST00000564266 1094 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC007620.3-201ENST00000608131 497 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL035661.1-201ENST00000620459 1144 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL691477.1-201ENST00000624398 162 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms