Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 AL049872.1-201ENST00000556323 322 ntBASIC5.05□□□□□ -1.6
LRRK2Q5S007 AC020910.2-201ENST00000603635 610 ntBASIC5.05□□□□□ -1.6
LRRK2Q5S007 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 AC005084.1-201ENST00000605160 304 ntBASIC5.05□□□□□ -1.6
LRRK2Q5S007 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRK2Q5S007 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRK2Q5S007 AL021877.2-201ENST00000624442 10684 ntBASIC5.05□□□□□ -1.6
LRRK2Q5S007 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRK2Q5S007 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LRRK2Q5S007 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AP000547.1-201ENST00000454360 617 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC002075.1-201ENST00000457396 676 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 RPS23P7-201ENST00000466210 444 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC008629.2-201ENST00000503783 483 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 BNIP3P5-201ENST00000562290 498 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL353796.1-201ENST00000561542 3241 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 ZNF733P-202ENST00000444809 1573 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 RPS4XP9-201ENST00000405151 780 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL390774.1-201ENST00000411924 246 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 RPS15AP30-201ENST00000420976 390 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 PRUNEP1-201ENST00000425846 705 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL138878.2-201ENST00000440581 1241 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC104164.1-201ENST00000460282 590 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC020898.1-201ENST00000474167 787 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 RN7SL604P-201ENST00000492589 296 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 HPRT1P1-201ENST00000509498 657 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL020997.2-201ENST00000602607 184 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRK2Q5S007 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC092111.1-201ENST00000618256 3358 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 AC008957.3-201ENST00000624112 2242 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 GUCY1B2-204ENST00000531898 1979 ntBASIC5.04□□□□□ -1.6
LRRK2Q5S007 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRK2Q5S007 AL359091.1-201ENST00000449048 1734 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC239367.2-201ENST00000447309 705 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 RPL7P45-201ENST00000455851 743 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC109462.1-201ENST00000491087 368 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC104687.2-201ENST00000604442 342 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 HIRAP1-201ENST00000605318 787 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AL133406.3-201ENST00000606817 541 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AL392048.1-201ENST00000613946 534 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC090638.1-201ENST00000498296 909 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 AC013701.1-201ENST00000522657 465 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms