Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC021242.1-201ENST00000507315 2035 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RN7SKP145-201ENST00000363291 303 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RNA5SP85-201ENST00000365378 119 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MIR188-201ENST00000385034 86 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AL139805.1-201ENST00000407837 289 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 UBTFL2-201ENST00000411859 1191 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 NPM1P40-201ENST00000412758 733 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RPL35AP31-201ENST00000418340 337 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC006509.1-201ENST00000420788 634 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 VN1R21P-201ENST00000426703 765 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC242426.1-201ENST00000435270 960 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC234771.4-201ENST00000441416 730 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 TRIM60P16-201ENST00000444048 694 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 TPT1P1-201ENST00000458495 518 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RN7SL39P-201ENST00000462264 297 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 ABCC13-202ENST00000463099 3842 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AP003385.3-201ENST00000472498 287 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 RPL38P3-201ENST00000484463 213 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC091544.1-201ENST00000484702 348 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC095052.1-201ENST00000509955 863 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 MIR6503-201ENST00000622884 86 ntBASIC5.22□□□□□ -1.57
CCDC58Q4VC31 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC58Q4VC31 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC58Q4VC31 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC58Q4VC31 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 SNORD94-201ENST00000386037 137 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL645936.1-201ENST00000441979 518 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 TCEA1P3-201ENST00000443005 880 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL445991.1-201ENST00000450381 475 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 RNU1-88P-201ENST00000459274 128 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 COX6B1P2-201ENST00000489624 230 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 RN7SL591P-201ENST00000496150 292 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms