Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 RNU6-1263P-201ENST00000384601 106 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC003045.1-201ENST00000398779 713 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AL158825.1-201ENST00000414735 521 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC234781.4-201ENST00000419384 244 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC108479.1-201ENST00000431142 427 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC016908.1-201ENST00000442571 1219 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC044797.1-201ENST00000445744 679 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 CYCSP42-201ENST00000450823 238 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 CALM1P2-201ENST00000452941 448 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 RN7SL382P-201ENST00000482631 282 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC117395.1-201ENST00000487390 403 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC008427.1-201ENST00000503102 655 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 PRELID3BP6-201ENST00000503839 571 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC018645.1-201ENST00000505003 109 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 RPL3P13-201ENST00000550415 216 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC004232.1-201ENST00000571388 208 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 OR7A19P-201ENST00000608051 733 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC112503.1-201ENST00000608436 391 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC063944.3-201ENST00000609969 533 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 AC005702.3-201ENST00000585345 1447 ntBASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CCDC144BQ3MJ40 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AP000547.3-204ENST00000588548 2523 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 MIR188-201ENST00000385034 86 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL929472.1-201ENST00000417484 429 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL139156.3-201ENST00000454802 394 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 DUXAP8-207ENST00000456786 622 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC104982.1-201ENST00000478775 574 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC079080.1-201ENST00000479841 822 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC109635.6-201ENST00000525487 1113 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC011921.2-201ENST00000589465 152 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AP002884.5-201ENST00000595053 1132 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC011492.1-201ENST00000600023 315 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC004805.3-201ENST00000603178 310 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC091193.1-201ENST00000604640 448 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC015982.1-201ENST00000608113 465 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AL121652.1-201ENST00000608851 448 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 DUXAP10-204ENST00000612052 616 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC073488.9-201ENST00000631601 754 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC006927.2-201ENST00000639256 389 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms