Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 HDAC1P2-201ENST00000453661 1398 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AP001541.1-201ENST00000623322 1904 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC097063.1-201ENST00000426714 1797 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 RNA5SP308-201ENST00000362532 115 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 RN7SKP69-201ENST00000365390 305 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC074375.1-201ENST00000372993 192 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 MT-TP-201ENST00000387461 68 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AL136131.1-201ENST00000406079 803 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 E2F6P1-201ENST00000428850 745 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC114878.1-201ENST00000441166 358 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 E2F6P3-201ENST00000441743 743 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 VN1R48P-201ENST00000448149 1036 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC093166.3-201ENST00000448785 303 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC037198.2-201ENST00000478845 733 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 RN7SL655P-201ENST00000486087 298 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC009567.2-201ENST00000502989 349 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 GLUD1P3-202ENST00000508551 200 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC090958.1-201ENST00000511122 351 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 RNU6-491P-201ENST00000516099 110 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 SLC25A51P2-201ENST00000535708 889 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC087888.1-201ENST00000550884 1254 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC090616.1-201ENST00000583895 447 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN1BQ07699 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 AL512430.4-201ENST00000603085 613 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC073333.2-201ENST00000603589 769 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN1BQ07699 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 RAB28P4-201ENST00000622233 665 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC006840.1-201ENST00000623069 542 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 AC021106.3-201ENST00000623925 531 ntBASIC5.42□□□□□ -1.54
SCN1BQ07699 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SCN1BQ07699 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SCN1BQ07699 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN1BQ07699 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN1BQ07699 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AL158152.1-201ENST00000602652 1435 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.41□□□□□ -1.54
SCN1BQ07699 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.41□□□□□ -1.54
SCN1BQ07699 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCN1BQ07699 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC092634.1-201ENST00000366505 199 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCN1BQ07699 MIR431-201ENST00000385266 114 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC019178.1-201ENST00000392337 440 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 VIM2P-201ENST00000402383 1294 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AL136116.2-201ENST00000404020 785 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 RN7SKP281-201ENST00000410472 352 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 MEAF6P1-201ENST00000416092 327 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 CDC42P6-201ENST00000421246 576 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 RPL23AP4-201ENST00000427757 463 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC007563.3-201ENST00000433233 371 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms