Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 OR13C1P-202ENST00000641378 2919 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RHBDL3P58872 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC245060.4-201ENST00000413293 1121 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.2□□□□□ -1.26
RHBDL3P58872 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.2□□□□□ -1.26
RHBDL3P58872 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.2□□□□□ -1.26
RHBDL3P58872 SUMO2P3-201ENST00000438311 288 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AL355355.1-201ENST00000442900 793 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.2□□□□□ -1.26
RHBDL3P58872 AOX3P-204ENST00000491025 2107 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC011411.1-201ENST00000509592 876 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 WBP1LP3-201ENST00000523033 208 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AP005639.1-201ENST00000526939 192 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.2□□□□□ -1.26
RHBDL3P58872 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.2□□□□□ -1.26
RHBDL3P58872 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 ZNF322P1-201ENST00000568013 1209 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC119403.2-201ENST00000590960 598 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC126175.1-201ENST00000617041 758 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 AC105105.5-201ENST00000622635 1294 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RHBDL3P58872 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.2□□□□□ -1.26
RHBDL3P58872 SAMMSON-210ENST00000641260 1308 ntBASIC7.2□□□□□ -1.26
RHBDL3P58872 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RHBDL3P58872 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RHBDL3P58872 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.19□□□□□ -1.26
RHBDL3P58872 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RHBDL3P58872 SELENOWP1-201ENST00000322792 252 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC005522.1-201ENST00000395416 346 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.19□□□□□ -1.26
RHBDL3P58872 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.19□□□□□ -1.26
RHBDL3P58872 CR848007.2-201ENST00000424918 787 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 MRPS33P4-201ENST00000434892 317 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 FABP5P2-201ENST00000439042 408 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AP000281.1-201ENST00000444036 316 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 OR13K1P-201ENST00000444577 975 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.19□□□□□ -1.26
RHBDL3P58872 HMGN1P36-201ENST00000446623 298 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.19□□□□□ -1.26
RHBDL3P58872 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC006530.1-201ENST00000555980 571 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 RNA5SP440-201ENST00000612665 119 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AC091948.2-201ENST00000636510 279 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 AP005432.1-201ENST00000580891 3485 ntBASIC7.19□□□□□ -1.26
RHBDL3P58872 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.19□□□□□ -1.26
RHBDL3P58872 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RHBDL3P58872 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.18□□□□□ -1.26
RHBDL3P58872 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RHBDL3P58872 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RHBDL3P58872 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RHBDL3P58872 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RHBDL3P58872 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RHBDL3P58872 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms