Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.23□□□□□ -1.41
PTPN9P43378 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.23□□□□□ -1.41
PTPN9P43378 AL590623.1-201ENST00000427864 105 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 GAPDHP75-201ENST00000433910 943 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AL392003.1-201ENST00000434394 243 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AL445928.1-201ENST00000435545 222 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AC005077.1-201ENST00000449226 375 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 PPIAP27-201ENST00000453800 265 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 RN7SL269P-201ENST00000467795 305 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 TRBV8-1-201ENST00000481590 279 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 RBBP4P1-201ENST00000502424 1276 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.23□□□□□ -1.41
PTPN9P43378 AC117525.1-201ENST00000515228 503 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 RN7SKP67-201ENST00000515905 235 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 RN7SKP288-201ENST00000516227 268 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.23□□□□□ -1.41
PTPN9P43378 OR8K2P-201ENST00000524645 927 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.23□□□□□ -1.41
PTPN9P43378 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.23□□□□□ -1.41
PTPN9P43378 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.23□□□□□ -1.41
PTPN9P43378 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.23□□□□□ -1.41
PTPN9P43378 RPA2P1-201ENST00000556557 721 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 AC002310.3-201ENST00000569728 723 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.23□□□□□ -1.41
PTPN9P43378 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 MIR6809-201ENST00000612189 116 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 AL138960.1-201ENST00000613838 513 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 AL136228.1-201ENST00000622221 319 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 PSG10P-201ENST00000501199 1500 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PTPN9P43378 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AC093225.1-201ENST00000506867 1408 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTPN9P43378 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTPN9P43378 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTPN9P43378 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 AL731532.1-201ENST00000623972 4236 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC005224.3-201ENST00000584683 2140 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTPN9P43378 COX6B1P3-201ENST00000312310 260 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 OR6K3-202ENST00000368146 996 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 RNU6-883P-201ENST00000384597 107 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AL512504.1-201ENST00000415494 778 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 RPL34P27-201ENST00000428810 349 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 BMS1P10-201ENST00000443754 1120 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 GEMIN2P1-201ENST00000454246 752 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 RPL31P53-201ENST00000457065 348 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 CR383656.1-201ENST00000484916 377 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 RN7SL649P-201ENST00000496974 275 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 LSM3P4-201ENST00000502948 309 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AC008629.2-201ENST00000503783 483 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 TOMM22P4-201ENST00000511318 336 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 RNA5SP473-201ENST00000516402 125 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC006518.1-201ENST00000541449 943 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC008507.3-201ENST00000585753 472 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AC090236.2-201ENST00000587933 1101 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC007423.1-201ENST00000605009 627 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AL136131.3-201ENST00000607600 188 ntBASIC6.22□□□□□ -1.41
PTPN9P43378 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPN9P43378 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC096708.4-201ENST00000620563 552 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms