Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSR1P43307 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSR1P43307 AC016583.1-201ENST00000624221 2431 ntBASIC6.36□□□□□ -1.39
SSR1P43307 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.36□□□□□ -1.39
SSR1P43307 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSR1P43307 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSR1P43307 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSR1P43307 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 AL031595.2-201ENST00000624215 19071 ntBASIC6.35□□□□□ -1.39
SSR1P43307 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 AC114876.1-201ENST00000490962 1366 ntBASIC6.35□□□□□ -1.39
SSR1P43307 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.35□□□□□ -1.39
SSR1P43307 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.35□□□□□ -1.39
SSR1P43307 RN7SKP184-201ENST00000362348 333 ntBASIC6.35□□□□□ -1.39
SSR1P43307 RN7SKP74-201ENST00000362849 309 ntBASIC6.35□□□□□ -1.39
SSR1P43307 RNU4-44P-201ENST00000363050 141 ntBASIC6.35□□□□□ -1.39
SSR1P43307 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SSR1P43307 VDAC2P1-201ENST00000399358 958 ntBASIC6.35□□□□□ -1.39
SSR1P43307 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.35□□□□□ -1.39
SSR1P43307 AC096632.2-201ENST00000438139 1239 ntBASIC6.35□□□□□ -1.39
SSR1P43307 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 ZNF619P1-201ENST00000446539 752 ntBASIC6.35□□□□□ -1.39
SSR1P43307 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 AC044810.1-201ENST00000480271 711 ntBASIC6.35□□□□□ -1.39
SSR1P43307 RPL23AP40-201ENST00000487630 390 ntBASIC6.35□□□□□ -1.39
SSR1P43307 AP002453.1-201ENST00000492327 668 ntBASIC6.35□□□□□ -1.39
SSR1P43307 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
SSR1P43307 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.35□□□□□ -1.39
SSR1P43307 RNA5SP441-201ENST00000516809 88 ntBASIC6.35□□□□□ -1.39
SSR1P43307 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.35□□□□□ -1.39
SSR1P43307 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.35□□□□□ -1.39
SSR1P43307 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.35□□□□□ -1.39
SSR1P43307 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.35□□□□□ -1.39
SSR1P43307 AP005136.2-201ENST00000583253 1049 ntBASIC6.35□□□□□ -1.39
SSR1P43307 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.35□□□□□ -1.39
SSR1P43307 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.35□□□□□ -1.39
SSR1P43307 MAPK10-350ENST00000641777 965 ntBASIC6.35□□□□□ -1.39
SSR1P43307 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SSR1P43307 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSR1P43307 AC004817.4-201ENST00000602396 3625 ntBASIC6.35□□□□□ -1.39
SSR1P43307 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 AC119674.1-202ENST00000641333 1860 ntBASIC6.34□□□□□ -1.39
SSR1P43307 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.34□□□□□ -1.39
SSR1P43307 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SSR1P43307 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.34□□□□□ -1.39
SSR1P43307 SNORD1C-201ENST00000363315 78 ntBASIC6.34□□□□□ -1.39
SSR1P43307 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 SNRPEP6-201ENST00000407465 277 ntBASIC6.34□□□□□ -1.39
SSR1P43307 AL139805.1-201ENST00000407837 289 ntBASIC6.34□□□□□ -1.39
SSR1P43307 SNORA77.2-201ENST00000408571 112 ntBASIC6.34□□□□□ -1.39
SSR1P43307 SNORA79B-201ENST00000410557 148 ntBASIC6.34□□□□□ -1.39
SSR1P43307 PTCD2P2-201ENST00000415579 1095 ntBASIC6.34□□□□□ -1.39
SSR1P43307 RPS15AP30-201ENST00000420976 390 ntBASIC6.34□□□□□ -1.39
SSR1P43307 RPL7AP51-201ENST00000422016 760 ntBASIC6.34□□□□□ -1.39
SSR1P43307 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 RPSAP32-201ENST00000432681 526 ntBASIC6.34□□□□□ -1.39
SSR1P43307 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SSR1P43307 AL390879.1-201ENST00000439143 386 ntBASIC6.34□□□□□ -1.39
SSR1P43307 CUBNP2-201ENST00000443534 1139 ntBASIC6.34□□□□□ -1.39
SSR1P43307 AC010240.2-201ENST00000445363 1205 ntBASIC6.34□□□□□ -1.39
SSR1P43307 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.34□□□□□ -1.39
SSR1P43307 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
SSR1P43307 NACAP5-201ENST00000509863 636 ntBASIC6.34□□□□□ -1.39
SSR1P43307 RNU6-513P-201ENST00000516104 104 ntBASIC6.34□□□□□ -1.39
SSR1P43307 RN7SKP288-201ENST00000516227 268 ntBASIC6.34□□□□□ -1.39
SSR1P43307 AC008429.4-201ENST00000521201 182 ntBASIC6.34□□□□□ -1.39
SSR1P43307 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.34□□□□□ -1.39
SSR1P43307 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.34□□□□□ -1.39
SSR1P43307 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.34□□□□□ -1.39
SSR1P43307 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.34□□□□□ -1.39
SSR1P43307 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.34□□□□□ -1.39
SSR1P43307 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.34□□□□□ -1.39
SSR1P43307 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.34□□□□□ -1.39
SSR1P43307 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSR1P43307 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SSR1P43307 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.34□□□□□ -1.4
SSR1P43307 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 RNU105B-201ENST00000364478 208 ntBASIC6.33□□□□□ -1.4
SSR1P43307 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms