Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PTPREP23469 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
PTPREP23469 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
PTPREP23469 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 RPL10P16-201ENST00000325000 645 ntBASIC9.11□□□□□ -0.95
PTPREP23469 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
PTPREP23469 Z97832.1-201ENST00000402490 328 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC9.11□□□□□ -0.95
PTPREP23469 SDCBPP1-201ENST00000440192 890 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AL022237.1-201ENST00000446663 358 ntBASIC9.11□□□□□ -0.95
PTPREP23469 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 RN7SL414P-201ENST00000469545 294 ntBASIC9.11□□□□□ -0.95
PTPREP23469 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC9.11□□□□□ -0.95
PTPREP23469 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AC010486.1-201ENST00000511793 424 ntBASIC9.11□□□□□ -0.95
PTPREP23469 RN7SKP13-201ENST00000515933 244 ntBASIC9.11□□□□□ -0.95
PTPREP23469 RNU6-943P-201ENST00000516960 98 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC105029.1-201ENST00000520250 669 ntBASIC9.11□□□□□ -0.95
PTPREP23469 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AP002748.2-201ENST00000528671 348 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC9.11□□□□□ -0.95
PTPREP23469 SERPINA15P-201ENST00000529287 266 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AP004607.5-201ENST00000532034 217 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 MRPL40P1-201ENST00000542687 604 ntBASIC9.11□□□□□ -0.95
PTPREP23469 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC9.11□□□□□ -0.95
PTPREP23469 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC9.11□□□□□ -0.95
PTPREP23469 AC025678.1-201ENST00000567861 338 ntBASIC9.11□□□□□ -0.95
PTPREP23469 MIR5192-201ENST00000579892 92 ntBASIC9.11□□□□□ -0.95
PTPREP23469 WDR45BP1-201ENST00000583470 1029 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC9.11□□□□□ -0.95
PTPREP23469 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AC022916.3-201ENST00000592961 742 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC129492.5-201ENST00000603489 315 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AL133351.5-201ENST00000612789 106 ntBASIC9.11□□□□□ -0.95
PTPREP23469 TUG1_3.1-201ENST00000616187 237 ntBASIC9.11□□□□□ -0.95
PTPREP23469 BX005040.2-201ENST00000620504 370 ntBASIC9.11□□□□□ -0.95
PTPREP23469 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 HSP90AB7P-201ENST00000450068 2454 ntBASIC9.11□□□□□ -0.95
PTPREP23469 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
PTPREP23469 AC087203.2-201ENST00000526502 1587 ntBASIC9.11□□□□□ -0.95
PTPREP23469 AC026464.2-201ENST00000567834 2421 ntBASIC9.11□□□□□ -0.95
PTPREP23469 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 LARP1BP1-201ENST00000506036 1359 ntBASIC9.11□□□□□ -0.95
PTPREP23469 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PTPREP23469 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC9.11□□□□□ -0.95
PTPREP23469 AC145138.1-201ENST00000512908 2851 ntBASIC9.1□□□□□ -0.95
PTPREP23469 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
PTPREP23469 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.1□□□□□ -0.95
PTPREP23469 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC9.1□□□□□ -0.95
PTPREP23469 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
PTPREP23469 OR9K2-201ENST00000305377 1122 ntBASIC9.1□□□□□ -0.95
PTPREP23469 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 Y_RNA.133-201ENST00000363428 110 ntBASIC9.1□□□□□ -0.95
PTPREP23469 Y_RNA.311-201ENST00000365068 96 ntBASIC9.1□□□□□ -0.95
PTPREP23469 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PTPREP23469 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 RNU2-47P-201ENST00000410649 186 ntBASIC9.1□□□□□ -0.95
PTPREP23469 RPL35AP24-201ENST00000413846 330 ntBASIC9.1□□□□□ -0.95
PTPREP23469 RPL12P27-201ENST00000414870 496 ntBASIC9.1□□□□□ -0.95
PTPREP23469 FCF1P2-201ENST00000415284 583 ntBASIC9.1□□□□□ -0.95
PTPREP23469 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC9.1□□□□□ -0.95
PTPREP23469 CDC42P6-201ENST00000421246 576 ntBASIC9.1□□□□□ -0.95
PTPREP23469 AC093084.1-201ENST00000424233 687 ntBASIC9.1□□□□□ -0.95
PTPREP23469 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC9.1□□□□□ -0.95
PTPREP23469 RPS25P9-201ENST00000435591 252 ntBASIC9.1□□□□□ -0.95
PTPREP23469 AC108039.2-201ENST00000440214 359 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms