Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RPSAP37-201ENST00000470913 821 ntBASIC5.11□□□□□ -1.59
USF1P22415 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USF1P22415 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USF1P22415 TMEM97P2-201ENST00000517841 403 ntBASIC5.11□□□□□ -1.59
USF1P22415 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 OR7E158P-201ENST00000524483 910 ntBASIC5.11□□□□□ -1.59
USF1P22415 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.11□□□□□ -1.59
USF1P22415 AC092865.1-201ENST00000544395 1023 ntBASIC5.11□□□□□ -1.59
USF1P22415 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USF1P22415 AC091078.2-201ENST00000557145 559 ntBASIC5.11□□□□□ -1.59
USF1P22415 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 OR4H6P-201ENST00000563771 921 ntBASIC5.11□□□□□ -1.59
USF1P22415 AC105036.1-201ENST00000566222 271 ntBASIC5.11□□□□□ -1.59
USF1P22415 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.11□□□□□ -1.59
USF1P22415 COX6CP7-201ENST00000597056 208 ntBASIC5.11□□□□□ -1.59
USF1P22415 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.11□□□□□ -1.59
USF1P22415 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 AL136228.1-201ENST00000622221 319 ntBASIC5.11□□□□□ -1.59
USF1P22415 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.11□□□□□ -1.59
USF1P22415 AC022726.2-201ENST00000634673 547 ntBASIC5.11□□□□□ -1.59
USF1P22415 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.11□□□□□ -1.59
USF1P22415 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.11□□□□□ -1.59
USF1P22415 AC015799.1-201ENST00000622996 3122 ntBASIC5.11□□□□□ -1.59
USF1P22415 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USF1P22415 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.11□□□□□ -1.59
USF1P22415 AL353763.1-201ENST00000624467 1628 ntBASIC5.11□□□□□ -1.59
USF1P22415 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USF1P22415 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.11□□□□□ -1.59
USF1P22415 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
USF1P22415 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USF1P22415 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.1□□□□□ -1.59
USF1P22415 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 RNA5SP242-201ENST00000364171 118 ntBASIC5.1□□□□□ -1.59
USF1P22415 RN7SKP292-201ENST00000365522 317 ntBASIC5.1□□□□□ -1.59
USF1P22415 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 RNU11-6P-201ENST00000391127 133 ntBASIC5.1□□□□□ -1.59
USF1P22415 AL445238.1-204ENST00000400311 463 ntBASIC5.1□□□□□ -1.59
USF1P22415 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 BX284632.2-201ENST00000421091 399 ntBASIC5.1□□□□□ -1.59
USF1P22415 WDR95P-201ENST00000425638 1542 ntBASIC5.1□□□□□ -1.59
USF1P22415 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.1□□□□□ -1.59
USF1P22415 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 AL136455.1-201ENST00000441083 1240 ntBASIC5.1□□□□□ -1.59
USF1P22415 AL512605.1-202ENST00000441919 381 ntBASIC5.1□□□□□ -1.59
USF1P22415 AC016908.1-201ENST00000442571 1219 ntBASIC5.1□□□□□ -1.59
USF1P22415 GAPDHP23-201ENST00000444823 993 ntBASIC5.1□□□□□ -1.59
USF1P22415 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AL359955.2-201ENST00000445380 353 ntBASIC5.1□□□□□ -1.59
USF1P22415 AC092967.1-201ENST00000449016 481 ntBASIC5.1□□□□□ -1.59
USF1P22415 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.1□□□□□ -1.59
USF1P22415 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.1□□□□□ -1.59
USF1P22415 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 AL122020.1-201ENST00000472287 459 ntBASIC5.1□□□□□ -1.59
USF1P22415 AC114728.1-201ENST00000488289 483 ntBASIC5.1□□□□□ -1.59
USF1P22415 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AC106872.5-201ENST00000508856 1416 ntBASIC5.1□□□□□ -1.59
USF1P22415 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.1□□□□□ -1.59
USF1P22415 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 RARSP1-201ENST00000542842 1418 ntBASIC5.1□□□□□ -1.59
USF1P22415 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.1□□□□□ -1.59
USF1P22415 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.1□□□□□ -1.59
USF1P22415 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.1□□□□□ -1.59
USF1P22415 AL049767.1-202ENST00000637826 242 ntBASIC5.1□□□□□ -1.59
USF1P22415 AC116667.2-201ENST00000641075 823 ntBASIC5.1□□□□□ -1.59
USF1P22415 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USF1P22415 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USF1P22415 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.1□□□□□ -1.59
USF1P22415 AC092692.1-201ENST00000623625 2595 ntBASIC5.1□□□□□ -1.59
USF1P22415 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms