Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 MIR551A-201ENST00000385042 96 ntBASIC9.6□□□□□ -0.87
CFTRP13569 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.6□□□□□ -0.87
CFTRP13569 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.6□□□□□ -0.87
CFTRP13569 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.6□□□□□ -0.87
CFTRP13569 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.6□□□□□ -0.87
CFTRP13569 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC9.6□□□□□ -0.87
CFTRP13569 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.6□□□□□ -0.87
CFTRP13569 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CFTRP13569 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.6□□□□□ -0.87
CFTRP13569 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 RN7SKP6-201ENST00000364795 319 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC007161.1-204ENST00000423039 460 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC245028.1-201ENST00000423259 256 ntBASIC9.59□□□□□ -0.87
CFTRP13569 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC9.59□□□□□ -0.87
CFTRP13569 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.59□□□□□ -0.87
CFTRP13569 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC9.59□□□□□ -0.87
CFTRP13569 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.59□□□□□ -0.87
CFTRP13569 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 AC024940.3-201ENST00000538551 316 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC092490.3-201ENST00000545370 572 ntBASIC9.59□□□□□ -0.87
CFTRP13569 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 MAPK10-304ENST00000641341 3984 ntBASIC9.59□□□□□ -0.87
CFTRP13569 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.59□□□□□ -0.87
CFTRP13569 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
CFTRP13569 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.59□□□□□ -0.87
CFTRP13569 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 AC005224.3-201ENST00000584683 2140 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AL133243.4-201ENST00000623116 3109 ntBASIC9.59□□□□□ -0.87
CFTRP13569 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
CFTRP13569 AC012618.3-205ENST00000637896 1496 ntBASIC9.59□□□□□ -0.87
CFTRP13569 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
CFTRP13569 AC016397.1-201ENST00000412463 242 ntBASIC9.59□□□□□ -0.87
CFTRP13569 TMA16P2-201ENST00000413187 601 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC093655.2-201ENST00000425735 631 ntBASIC9.59□□□□□ -0.87
CFTRP13569 RNU1-88P-201ENST00000459274 128 ntBASIC9.59□□□□□ -0.87
CFTRP13569 RPL37AP8-201ENST00000494116 276 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC079075.1-201ENST00000559543 878 ntBASIC9.59□□□□□ -0.87
CFTRP13569 AC091193.1-201ENST00000604640 448 ntBASIC9.59□□□□□ -0.87
CFTRP13569 MIR7703-201ENST00000620784 77 ntBASIC9.59□□□□□ -0.87
CFTRP13569 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFTRP13569 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFTRP13569 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.58□□□□□ -0.88
CFTRP13569 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFTRP13569 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
CFTRP13569 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 AC011504.1-201ENST00000623331 4103 ntBASIC9.58□□□□□ -0.88
CFTRP13569 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFTRP13569 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.58□□□□□ -0.88
CFTRP13569 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.58□□□□□ -0.88
CFTRP13569 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC9.58□□□□□ -0.88
CFTRP13569 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.58□□□□□ -0.88
CFTRP13569 AC006463.2-201ENST00000473326 348 ntBASIC9.58□□□□□ -0.88
CFTRP13569 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.58□□□□□ -0.88
CFTRP13569 PCNPP1-201ENST00000552501 511 ntBASIC9.58□□□□□ -0.88
CFTRP13569 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 CASC22-202ENST00000628396 802 ntTSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CFTRP13569 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CFTRP13569 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 AC006058.1-201ENST00000568686 5067 ntBASIC9.57□□□□□ -0.88
CFTRP13569 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms