Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NPIPB1P-202ENST00000588786 828 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 RPSAP75-201ENST00000605848 301 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AL512624.1-201ENST00000613638 469 ntBASIC5.87□□□□□ -1.47
LDLRP01130 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 FO681491.1-202ENST00000623392 737 ntBASIC5.87□□□□□ -1.47
LDLRP01130 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AC093225.1-201ENST00000506867 1408 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LDLRP01130 CASC19-246ENST00000641625 1606 ntBASIC5.87□□□□□ -1.47
LDLRP01130 ICE2P1-201ENST00000512800 1849 ntBASIC5.87□□□□□ -1.47
LDLRP01130 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
LDLRP01130 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 AL355834.1-201ENST00000556602 3965 ntBASIC5.87□□□□□ -1.47
LDLRP01130 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LDLRP01130 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LDLRP01130 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.86□□□□□ -1.47
LDLRP01130 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.86□□□□□ -1.47
LDLRP01130 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 MTCO1P22-201ENST00000604619 1360 ntBASIC5.86□□□□□ -1.47
LDLRP01130 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LDLRP01130 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 AL354868.1-201ENST00000417077 482 ntBASIC5.86□□□□□ -1.47
LDLRP01130 MTND2P12-201ENST00000417560 1252 ntBASIC5.86□□□□□ -1.47
LDLRP01130 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 AC006455.6-201ENST00000426192 893 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AC083862.1-201ENST00000427378 1242 ntBASIC5.86□□□□□ -1.47
LDLRP01130 IGLV3-4-201ENST00000432300 244 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AL731534.1-201ENST00000434711 269 ntBASIC5.86□□□□□ -1.47
LDLRP01130 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.86□□□□□ -1.47
LDLRP01130 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 RPL6P30-201ENST00000443382 862 ntBASIC5.86□□□□□ -1.47
LDLRP01130 RPL31P15-201ENST00000449770 338 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 RN7SKP35-201ENST00000517210 151 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.86□□□□□ -1.47
LDLRP01130 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 MIR132-201ENST00000591554 101 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AC006924.1-201ENST00000610750 559 ntBASIC5.86□□□□□ -1.47
LDLRP01130 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.86□□□□□ -1.47
LDLRP01130 MAPK10-350ENST00000641777 965 ntBASIC5.86□□□□□ -1.47
LDLRP01130 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.86□□□□□ -1.47
LDLRP01130 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.86□□□□□ -1.47
LDLRP01130 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.86□□□□□ -1.47
LDLRP01130 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LDLRP01130 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LDLRP01130 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 AL592429.1-201ENST00000403909 1473 ntBASIC5.85□□□□□ -1.47
LDLRP01130 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LDLRP01130 MIR323A-201ENST00000362199 86 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AC087752.1-201ENST00000391360 558 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 AC097463.1-201ENST00000447288 481 ntBASIC5.85□□□□□ -1.47
LDLRP01130 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 PPIAP27-201ENST00000453800 265 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 AC025458.1-201ENST00000506046 166 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AC006499.4-201ENST00000510947 694 ntBASIC5.85□□□□□ -1.47
LDLRP01130 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 AC022826.1-201ENST00000519383 805 ntBASIC5.85□□□□□ -1.47
LDLRP01130 RPA2P3-201ENST00000533268 770 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 384.8 ms