Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC007683.2-201ENST00000624681 714 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 NAMPTP1-201ENST00000440465 2514 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 AL133243.4-201ENST00000623116 3109 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 MRE11P1-201ENST00000464884 2127 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 AL645733.1-201ENST00000402250 217 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 RN7SKP213-201ENST00000410746 298 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 RN7SKP29-201ENST00000410957 272 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFBP01127 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFBP01127 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 AC005297.1-201ENST00000444765 862 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AC009220.1-201ENST00000451614 275 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 RN7SL222P-201ENST00000476452 299 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AC022215.1-201ENST00000481770 362 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFBP01127 AL671862.1-201ENST00000515851 349 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 RN7SKP66-201ENST00000516681 231 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 OR56A7P-201ENST00000524865 941 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFBP01127 IGBP1P1-201ENST00000554337 1009 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFBP01127 AC022919.1-201ENST00000624979 626 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFBP01127 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 AC114786.1-201ENST00000512892 1415 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PDGFBP01127 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 LCOR-201ENST00000286067 4542 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 AC092724.1-201ENST00000624623 3397 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 MAPK10-365ENST00000641902 3825 ntBASIC6.04□□□□□ -1.44
PDGFBP01127 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PDGFBP01127 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFBP01127 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFBP01127 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 AC131971.1-201ENST00000332881 1482 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 AL022323.4-201ENST00000623980 13120 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFBP01127 AC007842.1-201ENST00000597336 2039 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 U8.4-201ENST00000363626 134 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 RNA5SP234-201ENST00000363916 119 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFBP01127 RNU6-167P-201ENST00000384292 106 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 MIR541-201ENST00000401360 84 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 CBX1P3-201ENST00000413296 527 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 RPL7L1P9-201ENST00000431298 745 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 OR7E116P-201ENST00000448529 957 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AC092967.1-201ENST00000449016 481 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AC083795.1-201ENST00000491760 320 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFBP01127 USP9YP2-201ENST00000504503 1000 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 OR51K1P-201ENST00000510214 950 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 USP9YP1-201ENST00000513521 1002 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFBP01127 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFBP01127 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDGFBP01127 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFBP01127 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFBP01127 AL713998.2-201ENST00000604538 1198 ntBASIC6.03□□□□□ -1.44
PDGFBP01127 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms