Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN2BO60939 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 AL359885.1-201ENST00000415786 903 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AL354766.1-201ENST00000423396 542 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AC108479.1-201ENST00000431142 427 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 BMS1P10-201ENST00000443754 1120 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AC098818.1-201ENST00000478593 252 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AC135999.1-201ENST00000478962 479 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 ASNSP4-201ENST00000511103 447 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN2BO60939 MAST4-IT1-201ENST00000514241 658 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 SETP21-201ENST00000514799 892 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 IGKV3D-25-201ENST00000519599 235 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN2BO60939 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN2BO60939 AP000619.2-201ENST00000546014 969 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 AC121758.1-202ENST00000556917 658 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 GARSP1-201ENST00000570895 719 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 MIR6809-201ENST00000612189 116 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AL136228.1-201ENST00000622221 319 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 AL109924.4-201ENST00000623089 670 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SCN2BO60939 CASC19-260ENST00000641828 2001 ntBASIC5.53□□□□□ -1.52
SCN2BO60939 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 MFSD8-219ENST00000641228 2559 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SCN2BO60939 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 AL158827.1-201ENST00000416300 391 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC015983.1-201ENST00000441577 373 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 AC097463.1-201ENST00000447288 481 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 GEMIN2P1-201ENST00000454246 752 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 RN7SL254P-201ENST00000460609 284 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 AC026782.2-201ENST00000510845 636 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN2BO60939 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC007346.1-201ENST00000569208 867 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN2BO60939 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN2BO60939 AL021918.2-201ENST00000613415 194 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 AC079776.5-201ENST00000641920 211 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 PROS2P-201ENST00000474651 1951 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SCN2BO60939 MTCO1P7-201ENST00000419523 1542 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SCN2BO60939 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 AL354854.1-201ENST00000455940 1363 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 PPBPP2-201ENST00000513150 1362 ntBASIC5.52□□□□□ -1.53
SCN2BO60939 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN2BO60939 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN2BO60939 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 AC092451.3-201ENST00000625067 1343 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 RNA5SP279-201ENST00000365513 117 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 SNORA51.9-201ENST00000384295 124 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AC087752.1-201ENST00000391360 558 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms