Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC025768.1-201ENST00000510057 267 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AP003049.1-201ENST00000529418 457 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC027176.2-201ENST00000559166 746 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 FAM72A-208ENST00000607379 1139 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AL355802.4-201ENST00000607635 548 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC019080.5-201ENST00000624891 757 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AL049767.1-202ENST00000637826 242 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC017002.4-201ENST00000604721 1525 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 PARP4P1-201ENST00000435945 2337 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 TMSB4XP2-201ENST00000335179 210 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 SNORD115-48-201ENST00000364764 76 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AL096800.1-201ENST00000405326 893 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 MIR1178-201ENST00000408396 91 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC023141.6-201ENST00000429418 337 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC239798.3-201ENST00000454459 408 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 MTND2P30-201ENST00000456663 382 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC008638.1-201ENST00000506035 866 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 Y_RNA.667-201ENST00000516212 107 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 OR4A6P-201ENST00000534364 970 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AL512506.1-201ENST00000613918 449 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC004477.3-201ENST00000614061 590 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AL445647.2-201ENST00000615170 130 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 RFPL4AP6-201ENST00000616792 846 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AP000577.1-201ENST00000624366 878 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC097372.4-201ENST00000625025 466 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 AC093278.2-201ENST00000564956 2485 ntBASIC8.57□□□□□ -1.04
USP35Q9P2H5 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USP35Q9P2H5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.57□□□□□ -1.04
USP35Q9P2H5 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC119674.1-204ENST00000641348 1343 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 U3.25-201ENST00000391209 220 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 RPL10P10-201ENST00000403509 664 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 PRUNEP1-201ENST00000425846 705 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms