Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 RPS23P9-201ENST00000448848 438 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 RN7SL352P-201ENST00000466002 277 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 RN7SL97P-201ENST00000486780 299 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AC023818.1-201ENST00000498379 384 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AC110775.1-201ENST00000513721 462 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 OR4H6P-201ENST00000563771 921 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AC024589.2-201ENST00000605642 1294 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 AL118522.2-201ENST00000616045 615 ntBASIC8.71□□□□□ -1.02
SCAPERQ9BY12 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCAPERQ9BY12 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AC015983.1-201ENST00000441577 373 ntBASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AC012616.1-201ENST00000600294 197 ntBASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AC104785.1-201ENST00000603220 588 ntBASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AC000068.2-201ENST00000608816 460 ntBASIC8.7□□□□□ -1.02
SCAPERQ9BY12 SAMMSON-209ENST00000641222 1100 ntBASIC8.7□□□□□ -1.02
SCAPERQ9BY12 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCAPERQ9BY12 AL391261.1-201ENST00000555712 1479 ntBASIC8.69□□□□□ -1.02
SCAPERQ9BY12 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 IMMTP1-201ENST00000435590 2219 ntBASIC8.69□□□□□ -1.02
SCAPERQ9BY12 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 MTHFD2P5-201ENST00000320415 844 ntBASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 MIR4646-201ENST00000580775 63 ntBASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 TAS2R6P-201ENST00000605022 826 ntBASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCAPERQ9BY12 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC112255.1-201ENST00000624070 2493 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 RNA5SP335-201ENST00000363817 110 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AL139128.1-201ENST00000413921 941 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AL807761.1-201ENST00000417622 171 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC019205.1-201ENST00000421830 730 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC006335.2-201ENST00000437993 330 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AL772161.1-201ENST00000439130 476 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 HNRNPCP1-201ENST00000556181 766 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC100827.5-201ENST00000615883 426 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC011504.1-201ENST00000623331 4103 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 AC005618.1-201ENST00000606901 3148 ntBASIC8.68□□□□□ -1.02
SCAPERQ9BY12 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.68□□□□□ -1.02
SCAPERQ9BY12 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SCAPERQ9BY12 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.67□□□□□ -1.02
SCAPERQ9BY12 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCAPERQ9BY12 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms