Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 DCAF13P2-201ENST00000514188 555 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 RNU6-528P-201ENST00000516926 100 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC130366.1-201ENST00000526505 1192 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 SAA3P-201ENST00000533267 365 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AP000873.5-201ENST00000533906 236 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 ADI1P3-201ENST00000549509 470 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 NBEAP1-201ENST00000554452 979 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 SNORA59B-202ENST00000578183 701 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 RN7SL426P-201ENST00000579106 295 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 MIR378H-201ENST00000579966 83 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 SIGLEC31P-201ENST00000594237 551 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 MTCO3P22-201ENST00000603219 784 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AL356986.1-201ENST00000604085 341 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC104184.1-201ENST00000607513 721 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC245407.2-201ENST00000614199 451 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC012676.3-201ENST00000614983 479 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 AC012629.3-201ENST00000623397 328 ntBASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.9□□□□□ -1.46
SSBP3Q9BWW4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 AC004023.1-201ENST00000561473 1744 ntBASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 MTND4P23-201ENST00000447723 1363 ntBASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 AC073342.2-201ENST00000595842 1800 ntBASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSBP3Q9BWW4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AC018765.1-201ENST00000623357 3446 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 RNU6-1017P-201ENST00000363613 106 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 Y_RNA.248-201ENST00000364501 109 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 U6.112-201ENST00000384129 70 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 CXADRP1-201ENST00000398098 1095 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL590084.2-201ENST00000401481 382 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL049610.1-201ENST00000423374 372 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL121916.1-201ENST00000429405 308 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 COX7BP2-201ENST00000437976 242 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 USP9YP22-201ENST00000438971 294 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AC009518.3-201ENST00000438972 253 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 CASP3P1-201ENST00000446037 609 ntBASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.89□□□□□ -1.47
SSBP3Q9BWW4 AL354872.1-201ENST00000456361 967 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms