Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC092332.1-201ENST00000563684 829 ntBASIC5.88□□□□□ -1.47
PKP4Q99569 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.88□□□□□ -1.47
PKP4Q99569 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.88□□□□□ -1.47
PKP4Q99569 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.88□□□□□ -1.47
PKP4Q99569 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.88□□□□□ -1.47
PKP4Q99569 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 AC119403.2-201ENST00000590960 598 ntBASIC5.88□□□□□ -1.47
PKP4Q99569 AC091167.5-201ENST00000605689 894 ntBASIC5.88□□□□□ -1.47
PKP4Q99569 AL133406.3-201ENST00000606817 541 ntBASIC5.88□□□□□ -1.47
PKP4Q99569 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PKP4Q99569 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.88□□□□□ -1.47
PKP4Q99569 AL354854.1-201ENST00000455940 1363 ntBASIC5.88□□□□□ -1.47
PKP4Q99569 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PKP4Q99569 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.88□□□□□ -1.47
PKP4Q99569 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PKP4Q99569 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PKP4Q99569 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PKP4Q99569 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PKP4Q99569 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 Z95114.1-201ENST00000624264 14574 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 SNORA51.9-201ENST00000384295 124 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 MIR130B-202ENST00000385018 82 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.87□□□□□ -1.47
PKP4Q99569 RNA5SP431-201ENST00000410312 120 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 AC245096.1-201ENST00000413104 546 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC098592.2-201ENST00000413158 265 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 REREP1Y-201ENST00000422655 198 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 MGAT2P2-201ENST00000427194 797 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 TRIM60P13-201ENST00000432350 1283 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 PNKDP1-201ENST00000435914 430 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 RAB9AP5-201ENST00000437794 597 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 REREP2Y-201ENST00000439103 200 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.87□□□□□ -1.47
PKP4Q99569 RAB9AP2-201ENST00000443911 597 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 AL162739.1-201ENST00000450606 307 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC114728.1-201ENST00000488289 483 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AL133372.1-201ENST00000493565 745 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 RN7SL649P-201ENST00000496974 275 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC122718.2-201ENST00000505325 591 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC113398.2-201ENST00000507630 558 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC026782.2-201ENST00000510845 636 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.87□□□□□ -1.47
PKP4Q99569 IGKV3D-25-201ENST00000519599 235 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.87□□□□□ -1.47
PKP4Q99569 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.87□□□□□ -1.47
PKP4Q99569 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.87□□□□□ -1.47
PKP4Q99569 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.87□□□□□ -1.47
PKP4Q99569 uc_338.26-201ENST00000612659 160 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC004801.6-201ENST00000616571 978 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 AC073592.7-201ENST00000623659 507 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AC106730.3-201ENST00000624568 641 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 AC104966.1-201ENST00000467010 1464 ntBASIC5.87□□□□□ -1.47
PKP4Q99569 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.87□□□□□ -1.47
PKP4Q99569 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
PKP4Q99569 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKP4Q99569 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.86□□□□□ -1.47
PKP4Q99569 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PKP4Q99569 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
PKP4Q99569 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
PKP4Q99569 AC007842.1-201ENST00000597336 2039 ntBASIC5.86□□□□□ -1.47
PKP4Q99569 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKP4Q99569 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms