Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC024940.3-201ENST00000538551 316 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 SS18L2P2-201ENST00000583960 235 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AL512782.1-201ENST00000603093 364 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AL031320.1-201ENST00000604177 357 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MLECP1-201ENST00000615893 709 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC090527.3-201ENST00000619041 548 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC144833.1-201ENST00000567953 4089 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 CASC19-205ENST00000641013 1411 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC097721.1-201ENST00000427150 1253 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC004975.1-201ENST00000428733 208 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AL022237.1-201ENST00000446663 358 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC022034.3-201ENST00000471393 478 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC139493.1-201ENST00000604368 397 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 AC068724.3-201ENST00000625906 87 ntBASIC5.46□□□□□ -1.54
VPS13AQ96RL7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS13AQ96RL7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC092570.3-201ENST00000420113 693 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC021006.3-201ENST00000530771 192 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC103792.1-201ENST00000603591 919 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ABCA11P-202ENST00000504019 2110 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC211486.3-201ENST00000412694 621 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 MYL6P5-201ENST00000412707 459 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 NIFKP3-201ENST00000417799 865 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 RPS3AP38-201ENST00000435889 763 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 TRY2P-201ENST00000448860 689 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 RN7SKP288-201ENST00000516227 268 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC021678.3-201ENST00000517893 476 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 HMGB1P23-201ENST00000518743 568 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 RN7SL690P-201ENST00000582087 240 ntBASIC5.45□□□□□ -1.54
VPS13AQ96RL7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS13AQ96RL7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms