Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MCTS2P-201ENST00000394552 546 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 RN7SKP240-201ENST00000410583 375 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 RN7SKP97-201ENST00000410966 333 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC105402.1-201ENST00000413336 545 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC096537.2-201ENST00000413707 714 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC069154.1-201ENST00000432914 542 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC007679.3-201ENST00000434035 414 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 GAPDHP59-201ENST00000435908 267 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 HMGN1P2-201ENST00000445197 310 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 MTCYBP11-201ENST00000447254 1109 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 RN7SL39P-201ENST00000462264 297 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 RPS10P20-201ENST00000494130 463 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 RPL21P131-201ENST00000497298 483 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC026414.1-201ENST00000504046 698 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 OR52H2P-201ENST00000514607 902 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 DUXAP5-201ENST00000529668 529 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC026956.1-201ENST00000558741 396 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 ULK4P1-202ENST00000565174 503 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC026898.1-201ENST00000586404 571 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC245052.7-201ENST00000601161 359 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC025811.1-201ENST00000604312 472 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC002487.1-201ENST00000604565 994 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 Z99289.3-201ENST00000605586 594 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC015982.1-201ENST00000608113 465 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC104985.3-201ENST00000623479 597 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 MAPK10-323ENST00000641493 3207 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC092821.3-202ENST00000641304 2767 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 UGT2B26P-201ENST00000508672 1613 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AL133243.4-201ENST00000623116 3109 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 AC010401.2-201ENST00000575137 4934 ntBASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNPOQ8N3V7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 AC107980.1-201ENST00000558671 3355 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 U3.52-201ENST00000384034 216 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 RNU6-532P-201ENST00000384318 107 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 RNU6-452P-201ENST00000384406 107 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 YWHAZP6-201ENST00000399764 738 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 MTCO2P21-201ENST00000419780 677 ntBASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNPOQ8N3V7 RPL12P28-201ENST00000430852 489 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms