Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AKR1D1P1-201ENST00000457236 936 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AL079303.1-201ENST00000486611 463 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 OR4A43P-201ENST00000532938 908 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC027216.1-201ENST00000577726 685 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC010503.3-201ENST00000594355 540 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AL606537.1-201ENST00000607258 2011 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC007671.1-201ENST00000616957 830 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC104820.1-201ENST00000624183 307 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 AL031595.2-201ENST00000624215 19071 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 NXF4-202ENST00000416098 1465 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SCN1BQ07699 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 OR7A2P-201ENST00000304105 930 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 RN7SKP128-201ENST00000364270 303 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SCN1BQ07699 RNA5SP187-201ENST00000384400 119 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 FDPSP5-201ENST00000399474 1057 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AMZ2P2-201ENST00000406819 1057 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 METTL15P3-201ENST00000415522 1221 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC006065.1-201ENST00000422539 802 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 PTPN2P1-201ENST00000423212 1072 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AL589794.1-201ENST00000424971 390 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AL354707.3-201ENST00000427308 331 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC138761.5-201ENST00000433967 325 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 NPM1P18-201ENST00000434232 732 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.43□□□□□ -1.54
SCN1BQ07699 MTND3P4-201ENST00000453537 303 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 RPL36AP55-201ENST00000454114 305 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 RN7SL372P-201ENST00000461982 298 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 RN7SL350P-201ENST00000492591 299 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 BTG4P1-201ENST00000510421 183 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN1BQ07699 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC100814.1-201ENST00000606963 623 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AL008723.3-201ENST00000608926 449 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC084036.1-201ENST00000609190 508 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC027506.1-201ENST00000621395 198 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC019080.5-201ENST00000624891 757 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 AC092159.4-201ENST00000624944 550 ntBASIC5.43□□□□□ -1.54
SCN1BQ07699 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN1BQ07699 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN1BQ07699 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN1BQ07699 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms