Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FRG2MP-201ENST00000613317 856 ntBASIC5.95□□□□□ -1.46
CBX1P83916 AL035661.1-201ENST00000620459 1144 ntBASIC5.95□□□□□ -1.46
CBX1P83916 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.95□□□□□ -1.46
CBX1P83916 FKBP1AP4-201ENST00000631775 336 ntBASIC5.95□□□□□ -1.46
CBX1P83916 LINC02495-203ENST00000636704 242 ntBASIC5.95□□□□□ -1.46
CBX1P83916 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CBX1P83916 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CBX1P83916 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CBX1P83916 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CBX1P83916 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.95□□□□□ -1.46
CBX1P83916 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.95□□□□□ -1.46
CBX1P83916 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.95□□□□□ -1.46
CBX1P83916 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.95□□□□□ -1.46
CBX1P83916 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.94□□□□□ -1.46
CBX1P83916 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CBX1P83916 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 RN7SKP189-201ENST00000365042 330 ntBASIC5.94□□□□□ -1.46
CBX1P83916 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CBX1P83916 PDCL3P5-201ENST00000398028 722 ntBASIC5.94□□□□□ -1.46
CBX1P83916 MIR1231-201ENST00000408101 92 ntBASIC5.94□□□□□ -1.46
CBX1P83916 RN7SKP39-201ENST00000410773 322 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AC096921.1-201ENST00000411661 375 ntBASIC5.94□□□□□ -1.46
CBX1P83916 RPL12P9-201ENST00000412942 488 ntBASIC5.94□□□□□ -1.46
CBX1P83916 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 RPS7P14-201ENST00000426405 583 ntBASIC5.94□□□□□ -1.46
CBX1P83916 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.94□□□□□ -1.46
CBX1P83916 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 MTND6P12-201ENST00000428247 522 ntBASIC5.94□□□□□ -1.46
CBX1P83916 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.94□□□□□ -1.46
CBX1P83916 RPL14P5-201ENST00000436474 730 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AC234771.2-201ENST00000445718 597 ntBASIC5.94□□□□□ -1.46
CBX1P83916 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AC004129.2-201ENST00000457229 287 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AP000942.1-201ENST00000463969 747 ntBASIC5.94□□□□□ -1.46
CBX1P83916 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
CBX1P83916 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.94□□□□□ -1.46
CBX1P83916 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AC111000.5-201ENST00000506559 1178 ntBASIC5.94□□□□□ -1.46
CBX1P83916 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.94□□□□□ -1.46
CBX1P83916 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.94□□□□□ -1.46
CBX1P83916 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.94□□□□□ -1.46
CBX1P83916 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AC100784.1-201ENST00000522790 310 ntBASIC5.94□□□□□ -1.46
CBX1P83916 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.94□□□□□ -1.46
CBX1P83916 SETP17-201ENST00000534163 817 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 SLC25A51P2-201ENST00000535708 889 ntBASIC5.94□□□□□ -1.46
CBX1P83916 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.94□□□□□ -1.46
CBX1P83916 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 MIR1273F-201ENST00000580581 99 ntBASIC5.94□□□□□ -1.46
CBX1P83916 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.94□□□□□ -1.46
CBX1P83916 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.94□□□□□ -1.46
CBX1P83916 AL589935.2-201ENST00000616471 1231 ntBASIC5.94□□□□□ -1.46
CBX1P83916 AL122125.1-201ENST00000616999 600 ntBASIC5.94□□□□□ -1.46
CBX1P83916 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CBX1P83916 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CBX1P83916 NEAT1-202ENST00000501122 22743 ntBASIC5.94□□□□□ -1.46
CBX1P83916 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CBX1P83916 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
CBX1P83916 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 AC027088.4-201ENST00000611559 1947 ntBASIC5.93□□□□□ -1.46
CBX1P83916 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
CBX1P83916 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.93□□□□□ -1.46
CBX1P83916 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CBX1P83916 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CBX1P83916 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.93□□□□□ -1.46
CBX1P83916 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.93□□□□□ -1.46
CBX1P83916 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.93□□□□□ -1.46
CBX1P83916 SNX18P13-201ENST00000412442 529 ntBASIC5.93□□□□□ -1.46
CBX1P83916 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CBX1P83916 GRPEL2P2-201ENST00000421856 670 ntBASIC5.93□□□□□ -1.46
CBX1P83916 CLCN3P1-201ENST00000423965 1017 ntBASIC5.93□□□□□ -1.46
CBX1P83916 OR2AH1P-201ENST00000425717 928 ntBASIC5.93□□□□□ -1.46
CBX1P83916 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.93□□□□□ -1.46
CBX1P83916 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.93□□□□□ -1.46
CBX1P83916 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.93□□□□□ -1.46
CBX1P83916 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.93□□□□□ -1.46
CBX1P83916 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.93□□□□□ -1.46
CBX1P83916 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.93□□□□□ -1.46
CBX1P83916 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.93□□□□□ -1.46
CBX1P83916 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms