Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 AL157777.1-201ENST00000468100 304 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.92□□□□□ -1.46
AP1S1P61966 AC090424.1-201ENST00000535243 736 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.92□□□□□ -1.46
AP1S1P61966 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.92□□□□□ -1.46
AP1S1P61966 HMGN2P47-201ENST00000559378 272 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 AL163952.1-202ENST00000569625 600 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.92□□□□□ -1.46
AP1S1P61966 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 AC018628.1-201ENST00000624147 3819 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
AP1S1P61966 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 OR11H2-202ENST00000641517 1085 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 OR8G3P-202ENST00000641572 1255 ntBASIC5.92□□□□□ -1.46
AP1S1P61966 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
AP1S1P61966 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.92□□□□□ -1.46
AP1S1P61966 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP1S1P61966 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.91□□□□□ -1.46
AP1S1P61966 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
AP1S1P61966 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.91□□□□□ -1.46
AP1S1P61966 AP004289.1-201ENST00000436307 2205 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP1S1P61966 WDR95P-201ENST00000425638 1542 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
AP1S1P61966 RPS3AP2-201ENST00000407190 754 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 RN7SKP29-201ENST00000410957 272 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 RPS26P38-201ENST00000414476 348 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AC019205.1-201ENST00000421830 730 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.91□□□□□ -1.46
AP1S1P61966 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.91□□□□□ -1.46
AP1S1P61966 BX323845.3-201ENST00000428215 527 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AC073410.1-201ENST00000435125 589 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 RPS3AP38-201ENST00000435889 763 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AC015983.1-201ENST00000441577 373 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 SETP4-201ENST00000455717 868 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AC093166.4-201ENST00000457867 318 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 AC084754.1-201ENST00000463466 464 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.91□□□□□ -1.46
AP1S1P61966 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.91□□□□□ -1.46
AP1S1P61966 snoU109.5-201ENST00000516231 132 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP1S1P61966 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.91□□□□□ -1.46
AP1S1P61966 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.91□□□□□ -1.46
AP1S1P61966 MIR4260-201ENST00000583107 67 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 AP003789.1-201ENST00000617737 605 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 MIR6861-201ENST00000618657 64 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.91□□□□□ -1.46
AP1S1P61966 AP001153.1-201ENST00000641024 338 ntBASIC5.91□□□□□ -1.46
AP1S1P61966 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP1S1P61966 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.91□□□□□ -1.46
AP1S1P61966 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP1S1P61966 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.91□□□□□ -1.46
AP1S1P61966 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.91□□□□□ -1.46
AP1S1P61966 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP1S1P61966 AL592429.1-201ENST00000403909 1473 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
AP1S1P61966 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP1S1P61966 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
AP1S1P61966 GNG5P2-201ENST00000372054 207 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 SNORA70.9-201ENST00000384370 135 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 AL121977.1-201ENST00000401636 979 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.9□□□□□ -1.46
AP1S1P61966 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.9□□□□□ -1.46
AP1S1P61966 AP006222.1-205ENST00000450734 457 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.9□□□□□ -1.46
AP1S1P61966 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.9□□□□□ -1.46
AP1S1P61966 AP004609.2-201ENST00000532177 190 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.9□□□□□ -1.46
AP1S1P61966 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
AP1S1P61966 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.9□□□□□ -1.46
AP1S1P61966 AC079600.1-201ENST00000550326 297 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 DPPA3P2-202ENST00000557188 1219 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.9□□□□□ -1.46
AP1S1P61966 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.9□□□□□ -1.46
AP1S1P61966 AL049840.6-201ENST00000604583 345 ntBASIC5.9□□□□□ -1.46
AP1S1P61966 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP1S1P61966 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
AP1S1P61966 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms