Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA2P51531 SNORA67-201ENST00000384423 137 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AL360081.1-201ENST00000428299 555 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC090114.3-201ENST00000479267 829 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC10.09□□□□□ -0.79
SMARCA2P51531 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA2P51531 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC10.08□□□□□ -0.8
SMARCA2P51531 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SMARCA2P51531 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SMARCA2P51531 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC10.08□□□□□ -0.8
SMARCA2P51531 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC10.08□□□□□ -0.8
SMARCA2P51531 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SMARCA2P51531 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SMARCA2P51531 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA2P51531 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA2P51531 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA2P51531 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA2P51531 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA2P51531 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC10.08□□□□□ -0.8
SMARCA2P51531 AC006466.1-201ENST00000438721 289 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 AC009963.2-201ENST00000453431 138 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 AC091153.1-201ENST00000466297 402 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 RPS18P6-201ENST00000476880 458 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 AC105233.1-201ENST00000498840 781 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC10.08□□□□□ -0.8
SMARCA2P51531 AC090424.1-201ENST00000535243 736 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC10.08□□□□□ -0.8
SMARCA2P51531 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC10.08□□□□□ -0.8
SMARCA2P51531 PANDAR-201ENST00000629595 1506 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 LRRC37A9P-201ENST00000603850 5376 ntBASIC10.08□□□□□ -0.8
SMARCA2P51531 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA2P51531 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 AC006213.6-201ENST00000623722 4179 ntBASIC10.07□□□□□ -0.8
SMARCA2P51531 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMARCA2P51531 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
SMARCA2P51531 AC096775.1-201ENST00000437724 448 ntBASIC10.07□□□□□ -0.8
SMARCA2P51531 RPL7L1P3-201ENST00000455249 689 ntBASIC10.07□□□□□ -0.8
SMARCA2P51531 AC092905.1-201ENST00000467527 949 ntBASIC10.07□□□□□ -0.8
SMARCA2P51531 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA2P51531 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA2P51531 MAL2-207ENST00000522828 603 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA2P51531 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SMARCA2P51531 IARS-213ENST00000627121 4587 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA2P51531 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMARCA2P51531 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA2P51531 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA2P51531 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA2P51531 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC10.06□□□□□ -0.8
SMARCA2P51531 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 RNU4-2-201ENST00000365668 141 ntBASIC10.06□□□□□ -0.8
SMARCA2P51531 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SMARCA2P51531 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA2P51531 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC10.06□□□□□ -0.8
SMARCA2P51531 CEACAMP9-201ENST00000442990 513 ntBASIC10.06□□□□□ -0.8
SMARCA2P51531 RN7SL738P-201ENST00000470264 297 ntBASIC10.06□□□□□ -0.8
SMARCA2P51531 AC090607.5-201ENST00000615692 224 ntBASIC10.06□□□□□ -0.8
SMARCA2P51531 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA2P51531 GDA-209ENST00000545168 5362 ntTSL 2 BASIC10.06□□□□□ -0.8
SMARCA2P51531 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC10.06□□□□□ -0.8
SMARCA2P51531 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 AC114947.2-201ENST00000565748 2125 ntBASIC10.06□□□□□ -0.8
SMARCA2P51531 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA2P51531 AL391262.1-201ENST00000556558 1992 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 AL360271.1-201ENST00000395679 510 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 AC105399.1-202ENST00000447303 205 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 RPS29P33-201ENST00000456717 146 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC10.05□□□□□ -0.8
SMARCA2P51531 RNU6-941P-201ENST00000516346 108 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA2P51531 AC063949.1-201ENST00000552900 865 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 CASC22-201ENST00000569713 386 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 AC109583.2-201ENST00000617367 129 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 AC009704.2-201ENST00000618739 483 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 WWOX-217ENST00000620008 450 ntTSL 2 BASIC10.05□□□□□ -0.8
SMARCA2P51531 USP9YP3-201ENST00000434481 1766 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA2P51531 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms