Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GTF2IP8-201ENST00000560687 584 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC087283.1-201ENST00000604029 1074 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 AC024023.1-201ENST00000624530 922 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
RNF144AP50876 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 CASC19-205ENST00000641013 1411 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 ENO1P4-201ENST00000416471 1785 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 ENSAP3-201ENST00000312710 333 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 RPS27AP14-201ENST00000422868 454 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 AC018644.1-201ENST00000429934 551 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 AC018738.1-201ENST00000441378 210 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC107983.1-201ENST00000442562 210 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 SPRYD7P1-201ENST00000443861 570 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 RN7SL333P-201ENST00000476398 297 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 EIF3LP3-201ENST00000495197 822 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC107956.2-201ENST00000496042 454 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 NPM1P27-201ENST00000502784 830 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 HMGB1P29-201ENST00000505659 499 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 OR10J9P-201ENST00000511932 987 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AF131216.2-201ENST00000512316 564 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 RN7SKP197-201ENST00000517077 297 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 OR5AP1P-201ENST00000529730 940 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF144AP50876 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF144AP50876 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 AC011712.1-201ENST00000588959 234 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 MARK3P1-201ENST00000604796 643 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF144AP50876 7SK.12-201ENST00000612820 244 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 AC007342.8-201ENST00000623278 678 ntBASIC7.4□□□□□ -1.22
RNF144AP50876 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF144AP50876 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF144AP50876 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF144AP50876 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
RNF144AP50876 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.4□□□□□ -1.23
RNF144AP50876 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
RNF144AP50876 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF144AP50876 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF144AP50876 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
RNF144AP50876 MRPS17P1-201ENST00000596009 3130 ntBASIC7.4□□□□□ -1.23
RNF144AP50876 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RNF144AP50876 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RNF144AP50876 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
RNF144AP50876 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms