Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RXRGP48443 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.31□□□□□ -1.4
RXRGP48443 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.31□□□□□ -1.4
RXRGP48443 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 AC119674.1-213ENST00000641177 1386 ntBASIC6.31□□□□□ -1.4
RXRGP48443 LYARP1-201ENST00000436977 1501 ntBASIC6.3□□□□□ -1.4
RXRGP48443 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 HSPD1P8-201ENST00000400121 1658 ntBASIC6.3□□□□□ -1.4
RXRGP48443 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RXRGP48443 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RXRGP48443 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 SNORD16-201ENST00000362803 99 ntBASIC6.3□□□□□ -1.4
RXRGP48443 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 RNA5SP251-201ENST00000410614 137 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 Z68868.1-201ENST00000429048 544 ntBASIC6.3□□□□□ -1.4
RXRGP48443 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 RPS29P14-201ENST00000431518 171 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 AL590004.3-202ENST00000445883 451 ntBASIC6.3□□□□□ -1.4
RXRGP48443 VN1R48P-201ENST00000448149 1036 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.3□□□□□ -1.4
RXRGP48443 OR2AF1P-201ENST00000454899 889 ntBASIC6.3□□□□□ -1.4
RXRGP48443 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC025181.1-201ENST00000477507 416 ntBASIC6.3□□□□□ -1.4
RXRGP48443 OR7E99P-201ENST00000505750 922 ntBASIC6.3□□□□□ -1.4
RXRGP48443 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.3□□□□□ -1.4
RXRGP48443 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.3□□□□□ -1.4
RXRGP48443 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 TRIM77BP-201ENST00000524985 1119 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.3□□□□□ -1.4
RXRGP48443 HNRNPCP1-201ENST00000556181 766 ntBASIC6.3□□□□□ -1.4
RXRGP48443 CYCSP38-201ENST00000559840 322 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.3□□□□□ -1.4
RXRGP48443 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
RXRGP48443 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.3□□□□□ -1.4
RXRGP48443 AC008507.3-201ENST00000585753 472 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC073333.2-201ENST00000603589 769 ntBASIC6.3□□□□□ -1.4
RXRGP48443 KATNBL1P1-201ENST00000605192 748 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AC019131.2-201ENST00000609071 870 ntBASIC6.3□□□□□ -1.4
RXRGP48443 AL096712.1-201ENST00000614561 159 ntBASIC6.3□□□□□ -1.4
RXRGP48443 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 AC024884.1-201ENST00000620583 399 ntBASIC6.3□□□□□ -1.4
RXRGP48443 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.3□□□□□ -1.4
RXRGP48443 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RXRGP48443 AC008691.1-209ENST00000642094 814 ntBASIC6.3□□□□□ -1.4
RXRGP48443 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC006511.3-201ENST00000624929 1783 ntBASIC6.3□□□□□ -1.4
RXRGP48443 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.3□□□□□ -1.4
RXRGP48443 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 MTCO1P15-201ENST00000529569 1526 ntBASIC6.3□□□□□ -1.4
RXRGP48443 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRGP48443 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RXRGP48443 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RXRGP48443 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.29□□□□□ -1.4
RXRGP48443 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RXRGP48443 AL592429.1-201ENST00000403909 1473 ntBASIC6.29□□□□□ -1.4
RXRGP48443 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RXRGP48443 GTF2IP4-201ENST00000453092 2054 ntBASIC6.29□□□□□ -1.4
RXRGP48443 AC068870.3-201ENST00000625077 2536 ntBASIC6.29□□□□□ -1.4
RXRGP48443 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.29□□□□□ -1.4
RXRGP48443 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RXRGP48443 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RXRGP48443 RNU6-152P-201ENST00000384037 107 ntBASIC6.29□□□□□ -1.4
RXRGP48443 AC104297.1-201ENST00000393779 870 ntBASIC6.29□□□□□ -1.4
RXRGP48443 AL050335.1-201ENST00000396909 869 ntBASIC6.29□□□□□ -1.4
RXRGP48443 EEF1B2P8-201ENST00000414101 671 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms