Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 HMGB1P32-201ENST00000425971 565 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.85□□□□□ -1.31
POLR2AP24928 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.85□□□□□ -1.31
POLR2AP24928 OR13K1P-201ENST00000444577 975 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 AC099521.1-201ENST00000482557 334 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.85□□□□□ -1.31
POLR2AP24928 AC110760.3-202ENST00000515177 371 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 AC021678.3-201ENST00000517893 476 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.85□□□□□ -1.31
POLR2AP24928 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.85□□□□□ -1.31
POLR2AP24928 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
POLR2AP24928 AL118522.2-201ENST00000616045 615 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.85□□□□□ -1.31
POLR2AP24928 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.85□□□□□ -1.31
POLR2AP24928 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
POLR2AP24928 MFSD8-219ENST00000641228 2559 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.85□□□□□ -1.31
POLR2AP24928 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.84□□□□□ -1.31
POLR2AP24928 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.84□□□□□ -1.31
POLR2AP24928 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 PRUNEP1-201ENST00000425846 705 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 AL390879.2-203ENST00000426943 1121 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 AL450996.1-201ENST00000445574 1202 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.84□□□□□ -1.31
POLR2AP24928 MTND3P6-201ENST00000485242 339 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 RNA5SP228-201ENST00000516232 133 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 KCTD9P4-201ENST00000526766 1166 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 RBM22P12-201ENST00000567098 1255 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 RNU4ATAC-201ENST00000580972 127 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 ADAD1P2-201ENST00000588476 646 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 MIR6820-201ENST00000611508 62 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 AL139099.4-201ENST00000614802 114 ntBASIC6.84□□□□□ -1.31
POLR2AP24928 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.84□□□□□ -1.31
POLR2AP24928 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
POLR2AP24928 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.84□□□□□ -1.31
POLR2AP24928 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.84□□□□□ -1.31
POLR2AP24928 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
POLR2AP24928 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
POLR2AP24928 AC005294.1-201ENST00000355509 281 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
POLR2AP24928 RN7SKP103-201ENST00000363848 320 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 CASKP1-201ENST00000412870 582 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
POLR2AP24928 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.84□□□□□ -1.32
POLR2AP24928 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.84□□□□□ -1.32
POLR2AP24928 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
POLR2AP24928 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 VDAC2P4-201ENST00000452925 711 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 AC004129.2-201ENST00000457229 287 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 RPL23AP40-201ENST00000487630 390 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 RPL15P21-201ENST00000495592 567 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 AC072052.1-201ENST00000496556 306 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.84□□□□□ -1.32
POLR2AP24928 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.84□□□□□ -1.32
POLR2AP24928 AC126177.5-201ENST00000549599 178 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.84□□□□□ -1.32
POLR2AP24928 SNORD91A-202ENST00000609620 191 ntBASIC6.84□□□□□ -1.32
POLR2AP24928 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.84□□□□□ -1.32
POLR2AP24928 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.84□□□□□ -1.32
POLR2AP24928 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
POLR2AP24928 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.83□□□□□ -1.32
POLR2AP24928 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.83□□□□□ -1.32
POLR2AP24928 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.83□□□□□ -1.32
POLR2AP24928 AOX3P-204ENST00000491025 2107 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.83□□□□□ -1.32
POLR2AP24928 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.83□□□□□ -1.32
POLR2AP24928 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
POLR2AP24928 RNU1-106P-201ENST00000384382 164 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 GAPDHP42-201ENST00000406848 981 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.83□□□□□ -1.32
POLR2AP24928 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.83□□□□□ -1.32
POLR2AP24928 AC092017.2-201ENST00000427600 362 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 RPS7P3-201ENST00000443360 580 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 CBX1P2-201ENST00000453841 458 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 AL022319.1-201ENST00000458183 1167 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 AL672167.3-201ENST00000465951 960 ntBASIC6.83□□□□□ -1.32
POLR2AP24928 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms