Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
TOP2AP11388 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 AL645937.3-201ENST00000453647 936 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 IGLV2-34-201ENST00000490007 283 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 TOMM22P4-201ENST00000511318 336 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.83□□□□□ -0.84
TOP2AP11388 AC006115.2-201ENST00000596823 202 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC9.83□□□□□ -0.84
TOP2AP11388 IGLCOR22-2-201ENST00000605398 313 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 ZNF101P1-201ENST00000435701 1720 ntBASIC9.83□□□□□ -0.84
TOP2AP11388 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.83□□□□□ -0.84
TOP2AP11388 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.83□□□□□ -0.84
TOP2AP11388 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TOP2AP11388 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.83□□□□□ -0.84
TOP2AP11388 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC9.83□□□□□ -0.84
TOP2AP11388 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 SNORA56-201ENST00000383966 129 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 AC108161.1-201ENST00000461060 402 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC9.82□□□□□ -0.84
TOP2AP11388 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC9.82□□□□□ -0.84
TOP2AP11388 AL163952.1-202ENST00000569625 600 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.82□□□□□ -0.84
TOP2AP11388 AC006116.3-201ENST00000592968 361 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 CYP4F35P-202ENST00000636121 390 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.82□□□□□ -0.84
TOP2AP11388 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 AL359922.2-201ENST00000581788 3017 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
TOP2AP11388 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 SRSF1P1-201ENST00000424058 520 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 AC009784.1-201ENST00000426484 460 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 AC127381.1-201ENST00000555979 939 ntBASIC9.82□□□□□ -0.84
TOP2AP11388 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC9.82□□□□□ -0.84
TOP2AP11388 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.82□□□□□ -0.84
TOP2AP11388 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOP2AP11388 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 RN7SKP279-201ENST00000411383 298 ntBASIC9.81□□□□□ -0.84
TOP2AP11388 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOP2AP11388 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.81□□□□□ -0.84
TOP2AP11388 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
TOP2AP11388 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.81□□□□□ -0.84
TOP2AP11388 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC9.81□□□□□ -0.84
TOP2AP11388 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.81□□□□□ -0.84
TOP2AP11388 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.81□□□□□ -0.84
TOP2AP11388 MIR6820-201ENST00000611508 62 ntBASIC9.81□□□□□ -0.84
TOP2AP11388 WBP1LP8-201ENST00000617401 327 ntBASIC9.81□□□□□ -0.84
TOP2AP11388 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
TOP2AP11388 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC9.8□□□□□ -0.84
TOP2AP11388 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TOP2AP11388 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
TOP2AP11388 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TOP2AP11388 AC005034.3-201ENST00000604845 1747 ntBASIC9.8□□□□□ -0.84
TOP2AP11388 AC131649.2-201ENST00000624925 4439 ntBASIC9.8□□□□□ -0.84
TOP2AP11388 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC9.8□□□□□ -0.84
TOP2AP11388 RNU1-149P-201ENST00000390870 161 ntBASIC9.8□□□□□ -0.84
TOP2AP11388 AC090114.3-201ENST00000479267 829 ntBASIC9.8□□□□□ -0.84
TOP2AP11388 AC092593.2-201ENST00000513866 913 ntBASIC9.8□□□□□ -0.84
TOP2AP11388 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.8□□□□□ -0.84
TOP2AP11388 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.8□□□□□ -0.84
TOP2AP11388 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.8□□□□□ -0.84
TOP2AP11388 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
TOP2AP11388 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.79□□□□□ -0.84
TOP2AP11388 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.79□□□□□ -0.84
TOP2AP11388 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms