Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNA5SP487-201ENST00000410186 122 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 RNGTTP1-201ENST00000420965 728 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC112492.2-201ENST00000432774 1030 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AC096775.1-201ENST00000437724 448 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AL353803.3-201ENST00000444641 335 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AC073909.1-201ENST00000447112 999 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 RN7SL413P-201ENST00000482700 297 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 RPL38P3-201ENST00000484463 213 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL1P09341 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 RNA5SP418-201ENST00000515951 117 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 NATP-201ENST00000523491 878 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 AC008055.1-201ENST00000547032 609 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 AL390726.5-202ENST00000564800 256 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 DPRXP4-201ENST00000578053 568 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 MIR7853-201ENST00000584820 132 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL1P09341 MIR6811-201ENST00000620409 58 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 MIR6807-201ENST00000621968 92 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL1P09341 MTCO1P7-201ENST00000419523 1542 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CXCL1P09341 ZNF652P1-201ENST00000442420 1309 ntBASIC4.44□□□□□ -1.7
CXCL1P09341 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CXCL1P09341 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL1P09341 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL1P09341 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC104623.2-202ENST00000623477 4002 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 AL731566.1-201ENST00000620490 1937 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC092681.1-201ENST00000297369 291 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 OR7A2P-201ENST00000304105 930 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CXCL1P09341 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 RN7SKP78-201ENST00000364711 318 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 RNA5SP211-201ENST00000365516 117 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 AC007618.1-201ENST00000366455 732 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.43□□□□□ -1.7
CXCL1P09341 DHFRP2-201ENST00000414224 547 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 NANOGP4-201ENST00000427230 913 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC019185.3-201ENST00000438805 323 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 AL356133.1-201ENST00000444762 372 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.43□□□□□ -1.7
CXCL1P09341 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.43□□□□□ -1.7
CXCL1P09341 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 PRPF38AP1-201ENST00000451976 933 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.43□□□□□ -1.7
CXCL1P09341 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
CXCL1P09341 UBFD1P1-201ENST00000473259 814 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 RPS4XP17-201ENST00000479057 754 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 AC006539.1-201ENST00000481419 501 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 Y_RNA.710-201ENST00000516975 110 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 RN7SKP64-201ENST00000517206 328 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 IGKV1D-32-201ENST00000517449 318 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 AC092709.1-201ENST00000521355 1045 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC130366.1-201ENST00000526505 1192 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL1P09341 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 AC040958.1-201ENST00000561102 201 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms