Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092821.3-202ENST00000641304 2767 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 AC016397.1-201ENST00000412463 242 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 PTCD2P2-201ENST00000415579 1095 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 AL049745.1-201ENST00000433953 286 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 MIR4330-201ENST00000579077 105 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 AC091953.3-201ENST00000623220 236 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
RAPGEF3O95398 AC233968.1-201ENST00000611212 1300 ntBASIC8.77□□□□□ -1.01
RAPGEF3O95398 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 AC096921.2-201ENST00000561507 1916 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 RNA5SP305-201ENST00000362665 119 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 RN7SKP28-201ENST00000364770 305 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 GAPDHP42-201ENST00000406848 981 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 ZNF92P1Y-201ENST00000415010 1191 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 AC013470.3-201ENST00000420252 1194 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 AC097721.1-201ENST00000427150 1253 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 RPS29P33-201ENST00000456717 146 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 AL445647.2-201ENST00000615170 130 ntBASIC8.76□□□□□ -1.01
RAPGEF3O95398 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.76□□□□□ -1.01
RAPGEF3O95398 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RAPGEF3O95398 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 MAPK10-371ENST00000641952 5209 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 RNA5SP211-201ENST00000365516 117 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 USP9YP19-201ENST00000412165 485 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AC091390.1-201ENST00000433904 331 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 RPS11P7-201ENST00000442125 465 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 RN7SL346P-201ENST00000491561 294 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AL022394.1-201ENST00000606979 292 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 AC003992.1-201ENST00000635364 557 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 AC091948.2-201ENST00000636510 279 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 SAMMSON-209ENST00000641222 1100 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 AL008638.3-201ENST00000623027 5182 ntBASIC8.75□□□□□ -1.01
RAPGEF3O95398 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.75□□□□□ -1.01
RAPGEF3O95398 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RAPGEF3O95398 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms