Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR4C10P-201ENST00000434991 931 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RPL34P20-201ENST00000442771 351 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC063943.1-201ENST00000465434 453 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RNA5SP400-201ENST00000517155 111 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC021678.3-201ENST00000517893 476 ntBASIC2.45□□□□□ -2.02
USH2AO75445 DCN-209ENST00000546745 1026 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 AC106785.1-201ENST00000565935 262 ntBASIC2.45□□□□□ -2.02
USH2AO75445 MRPS5P4-201ENST00000592830 325 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RPL12P25-202ENST00000598100 674 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USH2AO75445 FAM71F2-205ENST00000641605 5749 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AL078621.3-201ENST00000623707 2042 ntBASIC2.45□□□□□ -2.02
USH2AO75445 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 AC139713.2-214ENST00000642059 1811 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AL607077.1-201ENST00000401718 499 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 FHP1-201ENST00000442741 703 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RPL6P5-201ENST00000445678 828 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC2.45□□□□□ -2.02
USH2AO75445 AC109327.1-201ENST00000471666 403 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 KPNA2P3-201ENST00000584190 848 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ZYXP1-201ENST00000617638 118 ntBASIC2.45□□□□□ -2.02
USH2AO75445 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 MAPK10-338ENST00000641647 3362 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 AC007529.1-201ENST00000418574 2178 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USH2AO75445 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 PHBP16-201ENST00000446318 950 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 USP3-201ENST00000268049 5311 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USH2AO75445 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 AC092647.1-201ENST00000420654 287 ntBASIC2.45□□□□□ -2.02
USH2AO75445 MGAT2P1-201ENST00000449718 797 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RSU1P1-201ENST00000453416 441 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms