Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 MFSD8-219ENST00000641228 2559 ntBASIC5.92□□□□□ -1.46
RIPK2O43353 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.92□□□□□ -1.46
RIPK2O43353 AC004158.1-201ENST00000564508 4319 ntBASIC5.92□□□□□ -1.46
RIPK2O43353 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK2O43353 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.92□□□□□ -1.46
RIPK2O43353 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RIPK2O43353 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 BCORP1-203ENST00000513194 5093 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RIPK2O43353 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
RIPK2O43353 RN7SKP69-201ENST00000365390 305 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 SNORA70.6-201ENST00000383934 134 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RIPK2O43353 SNRPEP6-201ENST00000407465 277 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AL139805.1-201ENST00000407837 289 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.91□□□□□ -1.46
RIPK2O43353 PTP4A1P1-201ENST00000420539 515 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC244033.1-201ENST00000426826 870 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 RPSAP65-201ENST00000429660 595 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 ARMC4P1-201ENST00000438905 707 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.91□□□□□ -1.46
RIPK2O43353 AL034369.1-201ENST00000453808 477 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 CTSLP6-201ENST00000458273 1002 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC063955.1-201ENST00000462872 685 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AL157777.1-201ENST00000468100 304 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC114324.2-202ENST00000503812 134 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC105384.2-201ENST00000508433 640 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC134698.1-201ENST00000511619 643 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RIPK2O43353 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC027216.1-201ENST00000577726 685 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.91□□□□□ -1.46
RIPK2O43353 AL512430.4-201ENST00000603085 613 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.91□□□□□ -1.46
RIPK2O43353 RPSAP75-201ENST00000605848 301 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AL451049.1-201ENST00000608672 497 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 RFPL4AP6-201ENST00000616792 846 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 CLUHP10-201ENST00000631979 980 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 HCFC2P1-201ENST00000392864 1592 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.91□□□□□ -1.46
RIPK2O43353 AC125336.1-201ENST00000508893 2827 ntBASIC5.91□□□□□ -1.46
RIPK2O43353 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RIPK2O43353 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK2O43353 AC006206.1-201ENST00000544842 3387 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK2O43353 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
RIPK2O43353 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
RIPK2O43353 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 RNA5SP110-201ENST00000362638 115 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 MIR27A-201ENST00000385073 78 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RIPK2O43353 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RIPK2O43353 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK2O43353 GPS2P1-201ENST00000411761 986 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 AC079809.1-201ENST00000415468 276 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 TRIM60P16-201ENST00000444048 694 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK2O43353 TREML3P-201ENST00000457327 501 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.9□□□□□ -1.46
RIPK2O43353 AP004609.2-201ENST00000532177 190 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.9□□□□□ -1.46
RIPK2O43353 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 AL022394.1-201ENST00000606979 292 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms