Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CUX2O14529 NPM1P40-201ENST00000412758 733 ntBASIC9.96□□□□□ -0.82
CUX2O14529 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC9.96□□□□□ -0.82
CUX2O14529 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.96□□□□□ -0.82
CUX2O14529 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC9.96□□□□□ -0.82
CUX2O14529 AC104164.1-201ENST00000460282 590 ntBASIC9.96□□□□□ -0.82
CUX2O14529 AC073594.1-201ENST00000462065 364 ntBASIC9.96□□□□□ -0.82
CUX2O14529 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC9.96□□□□□ -0.82
CUX2O14529 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.96□□□□□ -0.82
CUX2O14529 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.96□□□□□ -0.82
CUX2O14529 AC119403.2-201ENST00000590960 598 ntBASIC9.96□□□□□ -0.82
CUX2O14529 AL157831.2-201ENST00000564681 3095 ntBASIC9.96□□□□□ -0.82
CUX2O14529 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CUX2O14529 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC9.95□□□□□ -0.82
CUX2O14529 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.95□□□□□ -0.82
CUX2O14529 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.95□□□□□ -0.82
CUX2O14529 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.95□□□□□ -0.82
CUX2O14529 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.95□□□□□ -0.82
CUX2O14529 SNORA70.11-201ENST00000515987 138 ntBASIC9.95□□□□□ -0.82
CUX2O14529 SNORA70.13-201ENST00000516116 138 ntBASIC9.95□□□□□ -0.82
CUX2O14529 RN7SKP21-201ENST00000516503 220 ntBASIC9.95□□□□□ -0.82
CUX2O14529 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.95□□□□□ -0.82
CUX2O14529 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.95□□□□□ -0.82
CUX2O14529 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.95□□□□□ -0.82
CUX2O14529 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CUX2O14529 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CUX2O14529 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 OR10R3P-201ENST00000361688 942 ntBASIC9.94□□□□□ -0.82
CUX2O14529 RNA5SP335-201ENST00000363817 110 ntBASIC9.94□□□□□ -0.82
CUX2O14529 SNORA51.8-201ENST00000384234 132 ntBASIC9.94□□□□□ -0.82
CUX2O14529 AL133482.1-201ENST00000415988 498 ntBASIC9.94□□□□□ -0.82
CUX2O14529 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 AL513533.1-201ENST00000453728 415 ntBASIC9.94□□□□□ -0.82
CUX2O14529 AC004129.2-201ENST00000457229 287 ntBASIC9.94□□□□□ -0.82
CUX2O14529 AC090114.3-201ENST00000479267 829 ntBASIC9.94□□□□□ -0.82
CUX2O14529 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 MIR5095-201ENST00000578844 88 ntBASIC9.94□□□□□ -0.82
CUX2O14529 MAPK10-365ENST00000641902 3825 ntBASIC9.94□□□□□ -0.82
CUX2O14529 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CUX2O14529 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC9.94□□□□□ -0.82
CUX2O14529 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CUX2O14529 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.94□□□□□ -0.82
CUX2O14529 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
CUX2O14529 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CUX2O14529 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
CUX2O14529 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 DUTP5-201ENST00000406790 469 ntBASIC9.93□□□□□ -0.82
CUX2O14529 OR5W1P-201ENST00000423705 938 ntBASIC9.93□□□□□ -0.82
CUX2O14529 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 RPL31P44-201ENST00000447680 377 ntBASIC9.93□□□□□ -0.82
CUX2O14529 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC9.93□□□□□ -0.82
CUX2O14529 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.93□□□□□ -0.82
CUX2O14529 AC026979.1-201ENST00000492525 396 ntBASIC9.93□□□□□ -0.82
CUX2O14529 GTF2IP11-201ENST00000526931 420 ntBASIC9.93□□□□□ -0.82
CUX2O14529 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.93□□□□□ -0.82
CUX2O14529 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.93□□□□□ -0.82
CUX2O14529 PARP1P2-201ENST00000556806 195 ntBASIC9.93□□□□□ -0.82
CUX2O14529 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.93□□□□□ -0.82
CUX2O14529 AC132068.1-201ENST00000623805 459 ntBASIC9.93□□□□□ -0.82
CUX2O14529 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CUX2O14529 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CUX2O14529 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CUX2O14529 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CUX2O14529 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CUX2O14529 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CUX2O14529 AC114947.2-201ENST00000565748 2125 ntBASIC9.93□□□□□ -0.82
CUX2O14529 AC002090.1-201ENST00000625000 2138 ntBASIC9.93□□□□□ -0.82
CUX2O14529 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CUX2O14529 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CUX2O14529 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CUX2O14529 SNORA11F-201ENST00000408237 128 ntBASIC9.92□□□□□ -0.82
CUX2O14529 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.92□□□□□ -0.82
CUX2O14529 AC011742.2-201ENST00000443818 352 ntBASIC9.92□□□□□ -0.82
CUX2O14529 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.92□□□□□ -0.82
CUX2O14529 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.92□□□□□ -0.82
CUX2O14529 AC034205.1-201ENST00000520621 638 ntBASIC9.92□□□□□ -0.82
CUX2O14529 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC9.92□□□□□ -0.82
CUX2O14529 OR5AN2P-201ENST00000534535 896 ntBASIC9.92□□□□□ -0.82
CUX2O14529 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CUX2O14529 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
CUX2O14529 AC000068.2-201ENST00000608816 460 ntBASIC9.92□□□□□ -0.82
CUX2O14529 WBP1LP8-201ENST00000617401 327 ntBASIC9.92□□□□□ -0.82
CUX2O14529 AC022726.2-201ENST00000634673 547 ntBASIC9.92□□□□□ -0.82
CUX2O14529 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
CUX2O14529 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms