Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.6□□□□□ -1.35
DDX39AO00148 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.6□□□□□ -1.35
DDX39AO00148 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 MFSD8-219ENST00000641228 2559 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
DDX39AO00148 RNA5SP435-201ENST00000364044 108 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
DDX39AO00148 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 SNORA81-201ENST00000408493 178 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.6□□□□□ -1.35
DDX39AO00148 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.6□□□□□ -1.35
DDX39AO00148 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 SUMO2P3-201ENST00000438311 288 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 AL161636.2-201ENST00000445179 927 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.6□□□□□ -1.35
DDX39AO00148 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.6□□□□□ -1.35
DDX39AO00148 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 HMGN2P36-201ENST00000529541 409 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 AC135626.1-201ENST00000556983 435 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.6□□□□□ -1.35
DDX39AO00148 AC145423.1-201ENST00000605712 336 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.6□□□□□ -1.35
DDX39AO00148 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
DDX39AO00148 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DDX39AO00148 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.59□□□□□ -1.35
DDX39AO00148 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.59□□□□□ -1.35
DDX39AO00148 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DDX39AO00148 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
DDX39AO00148 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DDX39AO00148 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
DDX39AO00148 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
DDX39AO00148 SNORA17A-201ENST00000391185 133 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AC087752.1-201ENST00000391360 558 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AC127526.2-201ENST00000426436 775 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.59□□□□□ -1.35
DDX39AO00148 VN1R96P-201ENST00000446052 858 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AL445665.1-202ENST00000452436 324 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AC099521.1-201ENST00000482557 334 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AL035690.1-201ENST00000490892 383 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.59□□□□□ -1.35
DDX39AO00148 MIR2117-201ENST00000516780 80 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 OR4A42P-201ENST00000531397 938 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
DDX39AO00148 AC091078.2-201ENST00000557145 559 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.59□□□□□ -1.35
DDX39AO00148 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.59□□□□□ -1.35
DDX39AO00148 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.59□□□□□ -1.35
DDX39AO00148 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 SNORA17.5-201ENST00000630429 132 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DDX39AO00148 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
DDX39AO00148 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
DDX39AO00148 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.59□□□□□ -1.35
DDX39AO00148 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.59□□□□□ -1.35
DDX39AO00148 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
DDX39AO00148 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.59□□□□□ -1.36
DDX39AO00148 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.59□□□□□ -1.36
DDX39AO00148 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 HSPD1P8-201ENST00000400121 1658 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DDX39AO00148 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 ICE2P1-201ENST00000512800 1849 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 MIR375-201ENST00000362103 64 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.58□□□□□ -1.36
DDX39AO00148 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DDX39AO00148 HMGB1P20-201ENST00000402555 677 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 NACAP7-201ENST00000407371 609 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 DEFA9P-201ENST00000433042 285 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 HMGB3P24-201ENST00000433260 622 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.58□□□□□ -1.36
DDX39AO00148 NPM1P48-201ENST00000436002 853 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 AC064862.4-201ENST00000442180 334 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.58□□□□□ -1.36
DDX39AO00148 HMGN1P36-201ENST00000446623 298 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 RPS23P6-201ENST00000466136 431 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.58□□□□□ -1.36
DDX39AO00148 AC012146.2-201ENST00000576545 416 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 RN7SL787P-201ENST00000613000 284 ntBASIC6.58□□□□□ -1.36
DDX39AO00148 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DDX39AO00148 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.58□□□□□ -1.36
DDX39AO00148 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
DDX39AO00148 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 369.8 ms