Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC007136.1-201ENST00000589141 199 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 LSM1P2-201ENST00000604911 322 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SMG7-216ENST00000638826 219 ntTSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC087885.1-201ENST00000641910 848 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC099063.3-201ENST00000642066 185 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 NSRP1P1-201ENST00000444067 1693 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 ENSAP3-201ENST00000312710 333 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 Y_RNA.18-201ENST00000362461 102 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 RNU6-797P-201ENST00000363101 109 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 MIR548F1-201ENST00000408667 84 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC004448.2-201ENST00000422360 586 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 UBE2V1P8-201ENST00000437166 265 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AL591363.1-201ENST00000450091 483 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 RN7SL19P-201ENST00000462522 306 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 RN7SL223P-201ENST00000470401 294 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC072039.1-201ENST00000477611 581 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 RN7SL869P-201ENST00000497032 300 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC104108.1-201ENST00000509930 412 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC100823.2-201ENST00000518337 699 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 OR5F2P-201ENST00000532761 941 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 OR4A43P-201ENST00000532938 908 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 FXNP1-201ENST00000555153 337 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC084757.1-201ENST00000559987 490 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC244034.2-201ENST00000562504 509 ntBASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.36□□□□□ -1.39
SHISA3A0PJX4 SLC25A36P1-201ENST00000590111 465 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms