Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU6-185P-201ENST00000384421 107 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MIR654-201ENST00000385199 81 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MT-TL1-201ENST00000386347 75 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MT-TP-201ENST00000387461 68 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 SNORA40.3-201ENST00000390964 122 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU6-1300P-201ENST00000391046 108 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MTCYBP36-201ENST00000404146 440 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RBMY2GP-201ENST00000418671 1034 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RBMY2FP-202ENST00000420346 1263 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 FAF2P1-201ENST00000429974 1298 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MYO5BP3-201ENST00000431872 1279 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RBMY2NP-201ENST00000434454 1028 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC123904.1-201ENST00000441072 368 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC093166.3-201ENST00000448785 303 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC110749.1-201ENST00000462007 357 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC073610.1-201ENST00000489971 396 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MTND3P22-201ENST00000510932 243 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RFPL4AP3-201ENST00000515267 345 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AP005902.2-201ENST00000518393 307 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092133.1-201ENST00000565828 719 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 BPTFP1-201ENST00000579209 492 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC00674-202ENST00000590734 160 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AP000577.1-201ENST00000624366 878 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC106800.1-201ENST00000501221 1362 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RNY4P14-201ENST00000363656 96 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU4-59P-201ENST00000364447 116 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 SNORA55-201ENST00000364587 135 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RNA5SP23-201ENST00000391006 105 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms