Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 OR4A40P-201ENST00000533878 948 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 VN1R81P-201ENST00000602085 372 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 AC106028.5-201ENST00000610332 395 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 AC073348.1-201ENST00000623002 331 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 AC245060.6-201ENST00000624350 8420 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 TTC39DP-201ENST00000416781 1688 ntBASIC9.07□□□□□ -0.96
HPS5Q9UPZ3 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AL022578.1-201ENST00000439330 1433 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC016831.3-201ENST00000446451 1723 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RNU6-560P-201ENST00000364007 108 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 snoZ40.1-201ENST00000364540 72 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RNU6-1122P-201ENST00000384449 107 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AL451061.1-201ENST00000407887 862 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RN7SKP56-201ENST00000410513 331 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC068533.2-201ENST00000411872 306 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 PNRC2P1-201ENST00000423940 420 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 MTCYBP45-201ENST00000435243 565 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC064862.5-201ENST00000440618 334 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 FO393419.1-201ENST00000443746 355 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AL590326.1-201ENST00000460857 334 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RN7SL168P-201ENST00000463821 279 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC008629.3-201ENST00000505786 586 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 NATP-201ENST00000523491 878 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC006116.6-201ENST00000593258 1103 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC069304.2-201ENST00000605154 435 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC010680.4-201ENST00000605334 543 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AL359535.1-201ENST00000612100 1087 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC099063.3-201ENST00000642066 185 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 AC025040.2-201ENST00000558657 1852 ntBASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HPS5Q9UPZ3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 AP002907.1-201ENST00000606361 1430 ntBASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HPS5Q9UPZ3 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms