Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 RN7SKP77-201ENST00000363261 353 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC015977.1-201ENST00000418887 292 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AL035660.1-201ENST00000422041 222 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC016027.5-201ENST00000427227 210 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC104843.2-201ENST00000427666 297 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 RPL23AP19-201ENST00000436229 369 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 GEMIN2P1-201ENST00000454246 752 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 SETP20-201ENST00000457046 852 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 UBFD1P1-201ENST00000473259 814 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AL035690.1-201ENST00000490892 383 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 MTATP6P1-201ENST00000514057 681 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 TPM3P3-201ENST00000521343 354 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 IGKV3D-34-201ENST00000522638 302 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 PCNAP4-201ENST00000532690 730 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AL136131.3-201ENST00000607600 188 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 AC069234.4-201ENST00000621276 412 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC027088.4-201ENST00000611559 1947 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 OR52B3P-201ENST00000314715 928 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 RNA5SP435-201ENST00000364044 108 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AL031985.1-201ENST00000392713 418 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 RN7SKP151-201ENST00000410230 316 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 PTCD2P2-201ENST00000415579 1095 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 SETP9-201ENST00000423837 832 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 BMS1P10-201ENST00000443754 1120 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AP006222.1-205ENST00000450734 457 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 RAB28P2-201ENST00000454299 641 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 RN7SL352P-201ENST00000466002 277 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC023245.1-201ENST00000468501 517 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AL122020.1-201ENST00000472287 459 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC007998.1-201ENST00000474156 672 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC104109.1-201ENST00000498563 436 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC119403.2-201ENST00000590960 598 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AL359955.1-201ENST00000455242 3275 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 AC140479.2-201ENST00000421567 3130 ntBASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP2Q9UDT6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CLIP2Q9UDT6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 SELENOWP1-201ENST00000322792 252 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 RNU1-150P-201ENST00000362491 162 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC092642.1-201ENST00000392417 425 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 SEPT7P2-202ENST00000398921 823 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 NMD3P2-201ENST00000421815 761 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 RPL7P51-201ENST00000490532 749 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC008629.2-201ENST00000503783 483 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 AC093815.1-201ENST00000508637 280 ntBASIC7.02□□□□□ -1.29
CLIP2Q9UDT6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms